Job Description P18133 Confidence 100.00% Date Thu Jan 5 11:36:41 GMT 2012 Rank 6 Aligned Residues 349 % Identity 24% Template c2f7fA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase, putative; PDBTitle: crystal structure of enterococcus faecalis putative nicotinate2 phosphoribosyltransferase, new york structural genomics consortium Resolution 2.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																						.																						.	.
Query SS confidence																						.																						.	.
Query Sequence		H	S	L	L	D	T	D	A	Y	K	L	H	M	Q	Q	A	V	F	H	H	.	Y	Y	D	V	H	V	A	A	E	F	R	C	R	G	D	D	L	L	G	I	Y	.	.	A	D	A	I	R	E	Q	V	Q	A	M	Q	H	L	R	L	Q	D	D	E	Y	Q	W	L	S	A	L	P	F	F	K	A	D	Y	L	N
Query Conservation																						.																						.	.
Alig confidence																						.																						.	.
Template Conservation
Template Sequence		S	L	T	L	H	T	D	M	Y	Q	I	N	M	M	Q	T	Y	W	E	L	G	R	A	D	L	H	A	V	F	E	C	Y	F	R	E	M	P	F	N	H	G	Y	A	I	F	A	G	L	E	R	L	V	N	Y	L	E	N	L	T	F	T	E	S	D	I	A	Y	L	R	E	V	E	E	Y	P	E	D	F	L	T
Template Known Secondary structure			S	T	T		S														T	T		T	T										S	S		G	G	G		S																T														T	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		W	L	R	E	F	R	F	N	P	E	Q	V	T	V	S	N	D	N	G	K	L	D	.	.	.	.	I	R	L	S	G	P	W	R	E	V	I	L	W	E	V	P	L	L	A	V	I	S	E	M	V	H	R	Y	R	S	P	Q	A	D	V	A	Q	A	L	D	T	L	E	S	K	L	V	D	F	S	A	L	T	A
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	A	N	F	E	F	K	C	T	V	R	S	A	L	E	G	D	L	V	F	N	N	E	P	L	I	Q	I	E	G	P	L	A	Q	C	Q	L	V	E	T	A	L	L	N	M	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Q	T	L	I	A	T	K	A	A	R	I
Template Known Secondary structure					T												T	T					T	T	S		S																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																					.	.	.	140	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	D	M	S	R	F	H	L	M	D	F	G	T	R	R	R	F	S	R	E	V	Q	E	T	I	V	K	R	L	Q	Q	E	S	W	F	V	G	T	S	N	Y	D	L	A	R	R	L	S	L	T	P	M	G	T	Q	A	H	E	W	F	Q	A	H	Q	Q	I	S	P	D	L	A	N	S	Q	R	A	A	L	A
Query Conservation
Alig confidence																									.																																										.	.	.	.	.	.	.	.
Template Conservation																									.																																										.	.	.	.	.	.	.	.
Template Sequence		K	S	V	I	G	D	D	P	L	L	E	F	G	T	R	R	A	Q	E	L	D	A	A	.	I	W	G	T	R	A	A	Y	I	G	G	A	D	A	T	S	N	V	R	A	G	K	I	F	G	I	P	V	S	G	T	H	A	H	S	L	V	Q	S	Y	G	.	.	.	.	.	.	.	.	N	D	Y	E	A	F	M
Template Known Secondary structure						T	T	S							G	G	G	S	S	S					.											T					S												B													T	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																									.																																										.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.									.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.						.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																					.																.	.	.	.	.
Query SS confidence																					.																.	.	.	.	.
Query Sequence		A	W	L	E	E	Y	P	D	Q	L	G	I	A	L	T	D	C	I	T	.	M	D	A	F	L	R	D	F	G	V	E	F	A	S	R	.	.	.	.	.	Y	Q	G	L	R	H	D	S	G	D	P	V	E	W	G	E	K	A	I	A	H	Y	E	K	L	G	I	D	P	Q	S	K	T	L	V	F	S	D	N	L
Query Conservation																					.																.	.	.	.	.
Alig confidence										.	.										.																.	.	.	.	.																												.	.
Template Conservation										.	.																																																										.	.
Template Sequence		A	Y	A	K	T	H	R	D	.	.	C	V	F	L	V	D	T	Y	D	T	L	K	A	G	V	P	S	A	I	R	V	A	R	E	M	G	D	K	I	N	F	L	G	V	R	I	D	S	G	D	M	A	Y	I	S	K	R	V	R	E	Q	L	D	E	A	G	F	.	.	T	E	A	K	I	Y	A	S	N	D	L
Template Known Secondary structure								S		.	.							S	S		T	T	T	T													G	G	G	S									S	S																T	T		.	.	T	T							S	S
Template Predicted Secondary structure										.	.																																																										.	.
Template SS confidence
		220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.						.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																																																	.	.	.	.	.													.
Query SS confidence																																																	.	.	.	.	.													.
Query Sequence		D	L	R	K	A	V	E	L	Y	R	H	F	S	S	R	V	Q	L	S	F	G	I	G	T	R	L	T	C	D	I	P	Q	V	K	P	L	N	I	V	I	K	L	V	E	C	N	G	.	.	.	.	.	K	P	V	A	K	L	S	D	S	P	G	K	.	T	I	C	H	D	K	A	F	V	R	A	L	R	K	A
Query Conservation																																																	.	.	.	.	.													.
Alig confidence																	.	.												.																			.	.	.	.	.													.
Template Conservation																	.	.												.
Template Sequence		D	E	N	T	I	L	N	L	K	M	Q	K	S	K	I	.	.	D	V	W	G	V	G	T	K	L	I	T	.	A	Y	D	Q	P	A	L	G	A	V	F	K	L	V	S	I	E	G	E	D	G	Q	M	K	D	T	I	K	L	S	S	N	A	E	K	V	T	T	P	G	K	K	Q	V	W	R	I	T	R	K	S
Template Known Secondary structure												T	T				.	.											T	.	T	T	T	S															T	T	S	S									S	S	T	T	S	S				S										T	T
Template Predicted Secondary structure																	.	.												.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		391	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	K	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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