Job Description P18133 Confidence 99.92% Date Thu Jan 5 11:36:41 GMT 2012 Rank 21 Aligned Residues 243 % Identity 14% Template c2b7pA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of quinolinic acid phosphoribosyltransferase from2 helicobacter pylori Resolution 2.51 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		Y	Y	D	V	H	V	A	A	E	F	R	C	R	G	D	D	L	L	G	I	Y	A	D	A	I	R	E	Q	V	Q	A	M	Q	H	L	R	L	Q	D	D	E	Y	Q	W	L	S	A	L	P	F	F	K	A	D	Y	L	N	W	L	R	E	F	R	F	N	P	E	Q	V	T	V	S	N	D	N	G	K	L	D	.
Query Conservation																																																																																	.
Alig confidence																.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	D	F	K	A	T	A	F	V	R	A	K	Q	.	.	.	.	E	G	V	F	S	G	E	K	Y	A	L	E	L	L	E	M	T	G	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	V	Q	T	I	K	D	K	E	R	F	K	P	K
Template Known Secondary structure		S												S	S	.	.	.	.																	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T					T	T
Template Predicted Secondary structure																.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																													60	.	.	.	.	.	.	.	.	.	70	.	.	.
					109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	I	R	L	S	G	P	W	R	E	V	I	L	W	E	V	P	L	L	A	V	I	S	E	M	V	H	R	Y	R	S	P	Q	A	D	V	A	Q	A	L	D	T	L	E	S	K	L	V	D	F	S	A	L	T	A	G	L	D	M	S	R	F	H	L	M	D	F	G	T	R	R	R	F	S	R	E	V	Q
Query Conservation		.	.	.
Alig confidence		.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Sequence		D	A	L	M	E	I	R	G	D	F	S	M	L	L	K	V	E	R	T	L	L	N	L	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	S	G	I	A	T	L	T	S	R	F	V	E	A	L	N	S	H	K	V	R	L	L	D	T	R	K	T	R	P	L	.	.	L
Template Known Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			S	S	S						S				T	T	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		E	T	I	V	K	R	L	Q	Q	E	S	W	F	V	G	T	S	N	Y	D	L	A	R	R	L	S	L	T	P	M	G	T	Q	A	H	E	W	F	Q	A	H	Q	Q	I	S	P	D	L	A	N	S	Q	R	A	A	L	A	A	W	L	E	E	Y	P	.	D	Q	L	G	I	A	L	T	D	C	I	T	M	D	A
Query Conservation																																																																		.
Alig confidence																			.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.															.											.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Sequence		R	I	F	E	K	Y	S	V	L	N	G	G	A	S	N	H	R	.	.	.	.	.	.	.	L	G	L	D	D	A	L	M	L	K	D	T	H	L	R	H	V	K	.	.	.	.	.	.	.	.	D	L	K	S	F	L	T	H	A	R	K	N	L	P	F	T	A	K	I	E	I	E	C	E	S	.	.	.	.	.
Template Known Secondary structure												T	T		B				.	.	.	.	.	.	.	S	S	T	T	T										T	T		S	.	.	.	.	.	.	.	.										G	G	G	S		T	T								S	S	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.																										.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.									.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	R	D	F	G	V	E	F	A	S	R	Y	Q	G	L	R	H	D	S	G	D	P	V	E	W	G	E	K	A	I	A	H	Y	E	K	L	G	I	D	P	Q	S	K	T	L	V	F	S	D	N	L	D	L	R	K	A	V	E	L	Y	R	H	F	S	S	R	V	Q	L	S	F	G	I	G	T	R	L	T	C
Query Conservation
Alig confidence		.																										.												.	.	.																									.	.	.	.								.
Template Conservation		.																										.												.	.	.																									.	.	.	.								.
Template Sequence		.	F	E	E	A	K	N	A	M	N	A	G	A	D	I	V	M	C	D	N	L	S	V	L	E	T	.	K	E	I	A	A	Y	R	D	A	H	Y	.	.	.	P	F	V	L	L	E	A	S	G	N	I	S	L	E	S	I	N	A	Y	A	K	S	G	V	.	.	.	.	D	A	I	S	V	G	A	.	L	I	H
Template Known Secondary structure		.											T		S						S							.										S		.	.	.	T	T	S						S	S			T	T	T						T	T	T		.	.	.	.	S					T		.
Template Predicted Secondary structure		.																										.												.	.	.																									.	.	.	.								.
Template SS confidence
			192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.		.	260	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	P	Q	V	K	P	L	N	I	V	I	K	L	V
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	Q	A	T	F	I	D	M	H	M	K	M	A
Template Known Secondary structure		.	.	.	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					262	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions