Job Description P18133 Confidence 100.00% Date Thu Jan 5 11:36:41 GMT 2012 Rank 3 Aligned Residues 380 % Identity 33% Template c1vlpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of a putative nicotinate phosphoribosyltransferase2 (yor209c, npt1) from saccharomyces cerevisiae at 1.75 a resolution Resolution 1.75 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.
Predicted Secondary structure																																																.	.																									.
Query SS confidence																																																.	.																									.
Query Sequence		A	S	P	V	L	H	S	L	L	D	T	D	A	Y	K	L	H	M	Q	Q	A	V	F	H	H	Y	Y	D	V	H	V	A	A	E	F	R	C	R	G	D	D	L	L	G	I	Y	.	.	A	D	A	I	R	E	Q	V	Q	A	M	Q	H	L	R	L	Q	D	D	E	Y	Q	W	L	.	S	A	L	P	F	F	K
Query Conservation																																																.	.																									.
Alig confidence																																																.	.																									.
Template Conservation
Template Sequence		S	E	P	V	I	K	S	L	L	D	T	D	X	Y	K	I	T	X	H	A	A	V	F	T	N	F	P	D	V	T	V	T	Y	K	Y	T	N	R	S	S	Q	L	T	F	N	K	E	A	I	N	W	L	K	E	Q	F	S	Y	L	G	N	L	R	F	T	E	E	E	I	E	Y	L	K	Q	E	I	P	Y	L	P
Template Known Secondary structure					S				T	T	S	S	B															T	T										S		T	T			B															G	G	G																T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	Y	L	N	W	L	R	E	F	R	F	N	.	.	.	.	.	.	.	.	.	.	P	E	Q	V	T	V	S	N	D	N	G	K	L	D	I	R	L	S	G	P	W	R	E	V	I	L	W	E	V	P	L	L	A	V	I	S	E	M	V	H	R	Y	R	S	P	Q	A	D	V	A	Q	A	L	D	T	L	E
Query Conservation															.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		S	A	Y	I	K	Y	I	S	S	S	N	Y	K	L	H	P	E	E	Q	I	S	F	T	S	E	E	I	E	G	K	P	T	H	Y	K	L	K	I	L	V	S	G	S	W	K	D	T	I	L	Y	E	I	P	L	L	S	L	I	S	E	A	Y	F	K	F	V	D	I	D	W	D	Y	E	N	Q	.	.	.	.	.
Template Known Secondary structure										S	T	T																	T	T																			T	T	S																T							T	T		.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.										.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.
Query Sequence		S	K	L	V	D	F	S	A	L	T	A	G	L	D	M	S	R	F	H	L	M	D	F	G	T	R	R	R	F	S	R	E	V	.	.	.	.	.	.	.	.	.	Q	E	T	I	V	K	R	L	Q	Q	E	S	W	F	V	G	T	S	N	Y	D	L	A	R	R	L	S	L	T	P	M	G	T	Q	A	H	E	W
Query Conservation																																			.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	L	E	Q	A	E	K	K	A	E	T	L	F	D	N	G	I	R	F	S	E	F	G	T	R	R	R	R	S	L	K	A	Q	D	L	I	X	Q	G	I	X	K	A	V	N	G	N	P	D	R	N	K	S	L	L	L	G	T	S	N	I	L	F	A	K	K	Y	G	V	K	P	I	G	T	V	A	H	E	W
Template Known Secondary structure		.	.														T	T								S	T	T		S																			S					T	T	T					S	B								T			B
Template Predicted Secondary structure		.	.
Template SS confidence
				157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		F	Q	A	H	Q	Q	I	S	P	D	L	A	N	S	Q	R	A	A	L	A	A	W	L	E	E	Y	P	D	.	Q	L	G	I	A	L	T	D	C	I	T	M	D	A	F	L	R	D	F	G	V	E	F	A	S	R	Y	Q	G	L	R	H	D	S	G	D	P	V	E	W	G	E	K	A	I	A	H	Y	E	K	L
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		V	X	G	V	A	S	I	S	E	D	Y	L	H	A	N	K	N	A	X	D	C	W	I	N	T	F	G	A	K	N	A	G	L	A	L	T	D	T	F	G	T	D	D	F	L	K	S	F	R	P	P	Y	S	D	A	Y	V	G	V	R	Q	D	S	G	D	P	V	E	Y	T	K	K	I	S	H	H	Y	H	D	V
Template Known Secondary structure										T			T	T															G	G	G								T	T							T	T			T	T					S							S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		302		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.								.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure			.																											.																		.	.	.	.	.	.	.
Query SS confidence			.																											.																		.	.	.	.	.	.	.
Query Sequence		G	.	I	D	P	Q	S	K	T	L	V	F	S	D	N	L	D	L	R	K	A	V	E	L	Y	R	H	F	.	S	S	R	V	Q	L	S	F	G	I	G	T	R	L	T	C	D	.	.	.	.	.	.	.	I	P	Q	V	K	P	L	N	I	V	I	K	L	V	E	C	N	G	K	P	V	A	K	L	S	D	S
Query Conservation			.																											.																		.	.	.	.	.	.	.
Alig confidence			.																											.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	L	P	K	F	S	K	I	I	C	Y	S	D	S	L	N	V	E	K	A	I	T	Y	S	H	A	A	K	E	N	G	X	L	A	T	F	G	I	G	T	N	F	T	N	D	F	R	K	K	S	E	P	Q	V	K	S	E	P	L	N	I	V	I	K	L	L	E	V	N	G	N	H	A	I	K	I	S	D	N
Template Known Secondary structure		S				T	T	S	S						S	S																T	T													S					S	S	S	T	T	S															T	T					B			S	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	K	T	I	C	H	D	K	A	F	V	R	A	L	R	K	A	F	D
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		L	G	K	N	X	G	.	D	P	A	T	V	K	R	V	K	E	E	L	G
Template Known Secondary structure		T	T			B	S	.												T	T
Template Predicted Secondary structure								.
Template SS confidence
		395	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.