Return to main results Retrieve Phyre Job Id

Job DescriptionP18133
Confidence18.32%DateThu Jan 5 11:36:41 GMT 2012
Rank95Aligned Residues98
% Identity13%Templatec1sjaA_
PDB info PDB header:lyase, isomeraseChain: A: PDB Molecule:n-acylamino acid racemase; PDBTitle: x-ray structure of o-succinylbenzoate synthase complexed2 with n-acetylmethionine
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   284.....290.........300.........310.........320.........330.........340.........350.........360...
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  SGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNG
Query Conservation 


   
    
  

  
       

 
  


  
  
           




 
 
     
 
  




   
Alig confidence 
















.

..




















........




























Template Conservation                   .
 ..   




   
   
  

 ........  
    
 



       
  
  
  
Template Sequence  MDTIPQLLDVVGGYLDE. GY. . VRIKLKIEPGWDVEPVRAVRE. . . . . . . . RFGDDVLLQVDANTAYTLGDAPQLARLDP
Template Known Secondary structure 
SS.T
..S

BTTBS........
SSS

TT
B
GGGTTGG
Template Predicted Secondary structure 



.

..


........












Template SS confidence 















































































   139140.........150..... .. ..160.........170........ .180.........190.........200.......
 
   364.....370.........380.........390.....
Predicted Secondary structure 














Query SS confidence 































Query Sequence  KPVAKLSDSPGKTICHDKAFVRALRKAFDLPH
Query Conservation   
  


    
   
 
   
        
 
Alig confidence 





.


..



















Template Conservation    
  
.


..    
      
      

Template Sequence  FGLLLI. EQP. . LEEEDVLGHAELARRIQTPI
Template Known Secondary structure  G

S
.

..B
TT
TTT
SS
Template Predicted Secondary structure 


.


..







Template SS confidence 































   208.210... ... ...220.........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions