Return to main results Retrieve Phyre Job Id

Job DescriptionP18133
Confidence99.85%DateThu Jan 5 11:36:41 GMT 2012
Rank26Aligned Residues232
% Identity15%Templatec1o4uA_
PDB info PDB header:transferaseChain: A: PDB Molecule:type ii quinolic acid phosphoribosyltransferase; PDBTitle: crystal structure of a nicotinate nucleotide pyrophosphorylase2 (tm1645) from thermotoga maritima at 2.50 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100........
Predicted Secondary structure 





























..
Query SS confidence 













































































. .
Query Sequence  YDVHVAAEFRCRGDDLLGIYADAIREQVQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSNDNGKLD. .
Query Conservation      
 
    
          

   
  
    

 


 

     
   

  
    
      
      
 ..
Alig confidence 














...


















............................












..
Template Conservation                 ... 
  
              ............................
     

  
  
 
Template Sequence  RNTTAGAHLLLKTEN. . . VVASGIEVSRMFLEKMGLL. . . . . . . . . . . . . . . . . . . . . . . . . . . . SKFNVEDGEYLEGTG
Template Known Secondary structure  TT


S...

STT
............................S

TT
S
Template Predicted Secondary structure 






...



............................










Template SS confidence 















































































   27..30.........40. ........50.........60 .........70.....
 
   109110.........120.........130.........140.........150.........160.........170.........180......
Predicted Secondary structure  ..













Query SS confidence  . .













































































Query Sequence  . . IRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSALTAGLDMSRFHLMDFGTRRRFSREVQE
Query Conservation  ..
 
 

     
 
 


 

                                    
    
 


 


    
  
Alig confidence  ..





















....................




















..








..

Template Conservation   
  
 
    
   

  

 
 ....................  




 
   
  
    
..  



 
 .. 
Template Sequence  VIGEIEGNTYKLLVAERTLLNVLS. . . . . . . . . . . . . . . . . . . . VMFSVATTTRRFAEKLKHAKI. . AATRKILPG. . LG
Template Known Secondary structure  ....................T
SSS..

S


TT..T
Template Predicted Secondary structure 
....................




..







..
Template SS confidence 















































































   76...80.........90......... 100.........110.........120 ......... 130.
 
   187..190.........200.........210.........220.........230.........240......... 250.........260.....
Predicted Secondary structure 






















.






Query SS confidence 






























































.















Query Sequence  TIVKRLQQESWFVGTSNYDLARRLSLTPMGTQAHEWFQAHQQISPDLANSQRAALAAWLEEYP. DQLGIALTDCITMDAF
Query Conservation       

  


 




 

   

   





 
            

  

      

.      
 

      
Alig confidence 













...............











........













.









......
Template Conservation       

  

 
 ...............


  


   
........    

   
        
 


 
......
Template Sequence  VLQKIAVVHGGGDC. . . . . . . . . . . . . . . VMIKDNHLKMYG. . . . . . . . SAERAVQEVRKIIPFTTKIEVEVEN. . . . . .
Template Known Secondary structure  T


...............
S........STTS
TTS
SS......
Template Predicted Secondary structure 



...............
........






......
Template SS confidence 















































































   132.......140..... ....150....... ..160.........170.........180..
 
   266...270.........280.........290.........300.........310.........320.........330.........340.....
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  LRDFGVEFASRYQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQLSFGIGTRLTCD
Query Conservation 
            


 



   
    
  

  
       

 
  


  
  
           




 
 
 
Alig confidence 
























.










...























....





.



.
Template Conservation    

  
   


 
 

      
.      
    ...  
 
 




    
      

....
 
 

.

  .
Template Sequence  LEDALRAVEAGADIVMLDNLSPEEV. KDISRRIKDIN. . . PNVIVEVSGGITEENVSLYDFETV. . . . DVISSS. RLTL.
Template Known Secondary structure  TT
SS

.
...TTS


TTTGGGG

TT
....
G.GGTS.
Template Predicted Secondary structure 







.
...









....

..
Template SS confidence 















































































   191........200.........210..... ....220...... ...230.........240.........250 ...... ...260
 
   346...350........
Predicted Secondary structure 







Query SS confidence 












Query Sequence  IPQVKPLNIVIKL
Query Conservation      
 
  



Alig confidence  ..










Template Conservation  .. 
   


  
Template Sequence  . . QEVFVDLSLEI
Template Known Secondary structure  ..S




Template Predicted Secondary structure  ..


Template SS confidence 












   261........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions