 |
Job Description | P76186 | Confidence | 6.48% | Date | Thu Jan 5 12:20:15 GMT 2012 |
Rank | 29 | Aligned Residues | 30 |
% Identity | 17% | Template | c3hzqA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:large-conductance mechanosensitive channel; |
PDBTitle: structure of a tetrameric mscl in an expanded intermediate2 state
|
Resolution | 3.82 Å |
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Q | L | W | D | I | A | Q | A | R | V | C | E | V | I | V | G | I | L | C | G | G | M | M | M | M | I | L | P | S |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |
|   |   |
|
|   |
|
|
|   |   |
|   |
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |
|
|
|   |   |
|
|   |
|
Template Sequence |   |
G | N | V | L | D | L | A | I | A | V | V | M | G | A | A | F | N | K | I | I | C | S | L | V | E | N | I | I | M | P |
Template Known Secondary structure |   |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|