Job Description P76186 Confidence 3.19% Date Thu Jan 5 12:20:15 GMT 2012 Rank 57 Aligned Residues 145 % Identity 17% Template c3c02A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaglyceroporin; PDBTitle: x-ray structure of the aquaglyceroporin from plasmodium falciparum Resolution 2.05 Å

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		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	C	T	L	M	M	I	G	A	W	S	I	A	S	Q	W	D	A	G	A	N	A	L	T	L	A	A	I	S	C	V	L	Y	S	A	V	A	A	P	F	K	S	L	S	L	L	M	R	T	L	V	L	L	S	L	F	S	F	V	V	K	F	G	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		G	L	A	V	F	F	G	I	L	V	S	A	K	L	S	G	A	H	.	.	.	.	.	.	L	N	L	A	V	S	I	G	L	S	S	I	N	K	F	D	L	K	K	I	P	V	Y	F	F	A	Q	L	L	G	A	F	V	G	T	S	T	V	Y	G	L	Y	H	G	F	I	S	N	S	K	I	P	Q	F	A	W
Template Known Secondary structure																				.	.	.	.	.	.		S										T	T	S	S		G	G	G																							T						T	T		S		T	T		S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
							432	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.														.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure		.	.	.	.	.										.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.										.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	V	Q	I	S	D	L	W	Q	F	.	L	L	F	L	F	P	L	L	A	T	M	Q	L	L	K	L	Q	M	P	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	L	W	G	Q	L	I	V	F	M	G	S	F	I	A	V	T	N	P	P	V	Y	D	F	A	D	F	L	N	D
Query Conservation		.	.	.	.	.										.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.										.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	S	R	N	P	S	I	S	L	T	G	A	F	F	N	E	L	I	L	T	G	I	L	L	L	V	I	L	V	V	V	D	E	N	I	C	G	K	F	H	I	L	K	L	S	S	V	V	G	L	I	I	L	C	I	G	I	T	F	G	G	N	T	G	F	A	L	N	P	S	R	D	L	G	S	R	F	L	S
Template Known Secondary structure		S					T	T	S																															S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
																					493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	A	K	I	V	G	V	A	L	A	W	L	A	F	A	I	L	R	P	G	S	D	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	A	Y	G	K	D	T	F	T	K	D	N	F	Y	F	W	V	P	L	V	A	P	C	V	G	S	V	V	F	C	Q	F	Y	D	K	V	I	C	P	L	V	D
Template Known Secondary structure							T									T	T																					T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions