Job Description P76186 Confidence 34.64% Date Thu Jan 5 12:20:15 GMT 2012 Rank 5 Aligned Residues 157 % Identity 13% Template c1ymgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:lens fiber major intrinsic protein; PDBTitle: the channel architecture of aquaporin o at 2.2 angstrom resolution Resolution 2.24 Å

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		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		G	L	R	T	F	C	T	L	M	M	I	G	A	W	S	I	A	S	Q	W	D	A	G	A	N	A	L	T	L	A	A	I	S	C	V	L	Y	S	A	V	A	A	P	F	K	S	L	S	L	L	M	R	T	L	V	L	L	S	L	F	S	F	V	V	K	F	G	L	M	V	Q	I	S	D	L	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																											.	.	.																																																.	.	.	.	.
Template Conservation																											.	.	.
Template Sequence		Q	V	A	L	A	F	G	L	A	L	A	T	L	V	Q	A	V	G	H	I	S	G	A	H	V	.	.	.	N	P	A	V	T	F	A	F	L	V	G	S	Q	M	S	L	L	R	A	I	C	Y	M	V	A	Q	L	L	G	A	V	A	G	A	A	V	L	Y	S	V	T	P	P	A	V	R	G	N	L	A	L	N
Template Known Secondary structure																			T	T	T	T					.	.	.	S										T	T	S	S																											S		T	T	T		T	T	T	T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
																438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.								.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Q	F	L	L	F	L	F	P	L	L	A	T	M	Q	L	L	K	L	Q	M	P	K	F	A	A	L	W	G	Q	L	I	V	F	M	G	S	.	.	.	.	.	.	.	F	I	A	V	T	N	P	P	V	Y	D	F	A	D	F	L	N	D	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.																			.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.																			.	.	.	.
Template Conservation
Template Sequence		T	L	H	P	G	V	S	V	G	Q	A	T	I	V	E	I	F	L	T	L	Q	F	V	L	C	I	F	A	T	Y	D	E	R	R	N	G	R	L	G	S	V	A	L	A	V	G	F	S	L	T	L	G	H	L	F	G	M	Y	Y	T	G	A	G	M	N	P	A	R	S	F	A	P	A	I	L	T	R	N	F	T
Template Known Secondary structure					T	T	S																										T	T	S		S																																									T			T
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
							493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	N	L	A	K	I	V	G	V	A	L	A	W	L	A	F	A	I	L	R	P	G	S	D	A	R	K	S	R	R	H
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		N	H	W	V	Y	W	V	G	P	V	I	G	A	G	L	G	S	L	L	Y	D	F	L	L	F	P	R	L	K	S	V	S	E	R	L
Template Known Secondary structure		T	T	T																			T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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