Job Description P76186 Confidence 13.57% Date Thu Jan 5 12:20:15 GMT 2012 Rank 11 Aligned Residues 140 % Identity 14% Template c1ldaA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:glycerol uptake facilitator protein; PDBTitle: crystal structure of the e. coli glycerol facilitator (glpf) without2 substrate glycerol Resolution 2.80 Å

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		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		T	F	C	T	L	M	M	I	G	A	W	S	I	A	S	Q	W	D	A	G	A	N	A	L	T	L	A	A	I	S	C	V	L	Y	S	A	V	A	A	P	F	K	S	L	S	L	L	M	R	T	L	V	L	L	S	L	F	S	F	V	V	K	F	G	L	M	V	Q	I	S	D	L	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		G	L	G	V	A	M	A	I	Y	L	T	A	G	V	S	G	A	H	.	.	.	.	.	.	L	N	P	A	V	T	I	A	L	W	L	F	A	C	F	D	K	R	K	V	I	P	F	I	V	S	Q	V	A	G	A	F	C	A	A	A	L	V	Y	G	L	Y	Y	N	L	F	F	D	F	E	Q	T	H	H	I	V
Template Known Secondary structure																				.	.	.	.	.	.													S				G	G	G																							T											T	T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.							.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
																															438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.				.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.		.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																						.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																						.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Q	F	L	L	F	L	F	P	L	L	A	T	M	Q	L	.	.	.	L	K	L	Q	M	P	K	F	A	A	L	W	G	Q	L	I	V	F	M	G	S	.	F	I	A	V	T	N	P	P	V	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																						.
Template Conservation
Template Sequence		R	G	S	V	E	S	V	D	L	A	G	T	F	S	T	Y	P	N	P	H	I	N	F	V	Q	A	F	A	V	E	M	V	I	T	A	I	L	M	G	L	I	L	A	L	T	D	D	G	N	G	V	P	R	G	P	L	A	P	L	L	I	G	L	L	I	A	V	I	G	A	S	M	G	P	L	T	G	F	A	M
Template Known Secondary structure		T	T	S	G	G	G					T	T	T	S					T	T																											T	T	S	S	S			G	G	G																T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		485	.	.	.	.	490	.	.	.	.	.	.																											.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	F	A	D	F	L	N	D	N	L	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	G	V	A	L	A	W	L	A	F	A	I	L	R
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	P	A	R	D	F	G	P	K	V	F	A	W	L	A	G	W	G	N	V	A	F	T	G	G	R	D	I	P	Y	F	L	V	P	L	F	G	P	I	V	G	A	I	V	G	A	F	A	Y	R	K	L	I
Template Known Secondary structure																T	T	T	T	T						S	S	S	S		T	T																						T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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