Job Description P0AEL0 Confidence 33.37% Date Thu Jan 5 11:23:36 GMT 2012 Rank 11 Aligned Residues 168 % Identity 14% Template c3mk7K_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit n; PDBTitle: the structure of cbb3 cytochrome oxidase Resolution 3.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	R	R	D	T	I	V	R	Y	T	A	P	E	R	I	N	H	W	I	T	A	F	C	F	I	L	A	A	V	S	G	L	G	F	L	F	P	S	F	N	W	L	M	Q	I	M	G	T	P	Q	L	A	R	I	L	H	P	F	V	G	V	V	M	F	A	S	F	I	I	M	F	F	R	Y	W	H	H	N	L
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		L	S	G	A	W	H	K	L	R	S	D	P	I	L	R	F	L	V	.	V	S	L	A	F	Y	G	M	S	T	F	E	G	P	M	M	A	I	K	T	V	N	A	L	S	H	Y	T	D	W	T	I	G	H	V	H	A	G	A	L	G	W	V	A	M	V	S	I	G	A	L	Y	H	L	V	P	K	V	F	G	R
Template Known Secondary structure		G	T	T	G	G	G													.																	T	S								T	T	S														T																	T	T
Template Predicted Secondary structure																				.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.									.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.
Query Sequence		I	N	R	D	D	I	F	W	A	K	N	I	R	K	I	V	V	N	E	E	V	G	D	T	G	R	Y	N	F	G	Q	K	C	V	F	W	A	A	I	I	F	L	V	L	L	L	V	S	.	.	.	.	.	.	.	.	G	V	I	I	W	R	P	Y	F	A	P	A	F	S	I	P	V	I	R	F	A	L	M	L
Query Conservation																																																		.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	M	H	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	I	N	T	H	F	W	L	A	T	I	G	T	V	L	Y	I	A	S	M	W	V	N	G	I	A	Q	G	L	M	W	R	A	I	N	D	D	G	T	L	T	Y	S	F	V	E	S	L	E	A	S
Template Known Secondary structure		S	S		S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			B		T	T	S	S	B	S	S									T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		373	.	.	.	.	.																							.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	F	A	A	V	A	L	I	V	V	I	M	V	H	I	Y	A	A	L	W	V	K	G	T	I	T	A	M	V	E	G	W	V	T	S	A	W	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	P	G	F	V	V	R	M	I	G	G	A	I	F	F	A	G	M	L	V	M	A	Y	N	T	W	R	T	V	Q	A	A	K	P	A	E	Y	D	A
Template Known Secondary structure																																S		S	S
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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