Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEL0
Confidence98.06%DateThu Jan 5 11:23:36 GMT 2012
Rank6Aligned Residues151
% Identity14%Templatec3cwbC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:cytochrome b; PDBTitle: chicken cytochrome bc1 complex inhibited by an iodinated analogue of2 the polyketide crocacin-d
Resolution3.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40..... ....50.........60.........70.........80.........
Predicted Secondary structure 








..........











Query SS confidence 

























. . . . . . . . . .











































Query Sequence  ITAFCFILAAVSGLGFLFPSFNWLMQ. . . . . . . . . . IMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWA
Query Conservation    
   
 
  

  
          ..........           
   
          
                 
Alig confidence 

























..........



































.






Template Conservation 

     





  
   
 
    
  

  
   
  
 


  
  


       

  
    
 
.
 

 
 
Template Sequence  LLAVCLMTQILTGLLLAMHYTADTSLAFSSVAHTCRNVQYGWLIRNLHANGASFFFICIFLHIGRGLYYGSY. LYKETWN
Template Known Secondary structure  TT


STTTSTTTTGG.GS
Template Predicted Secondary structure 







.

Template SS confidence 















































































   37..40.........50.........60.........70.........80.........90.........100........ .110.....
 
   90.........100.........110.........120..... ....130.........140.........150.........160.....
Predicted Secondary structure 







....






Query SS confidence 



































. . . .







































Query Sequence  KNIRKIVVNEEVGDTGRYNFGQKCVFWAAIIFLVLL. . . . LVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIM
Query Conservation                    
    
            ....  


                     

   
 


  
 
Alig confidence 



































....







































Template Conservation   

 
  
    

 

 


 
 
 
   
   
   

 

  
     

  
   

 


 

 


  
  
  
Template Sequence  TGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFSVDNPTLTRFFALHFLLPFAIAGITI
Template Known Secondary structure  TT
BGGGGGSSSTSSSS
Template Predicted Secondary structure 








Template SS confidence 















































































   116...120.........130.........140.........150.........160.........170.........180.........190.....
 
   166...170.
Predicted Secondary structure 
Query SS confidence 





Query Sequence  VHIYAA
Query Conservation   

  
Alig confidence 





Template Conservation   
   
Template Sequence  IHLTFL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   196...200.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions