|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | Q | R | I | T | I | A | P | Q | G | P | E | F | S | R | F | V | M | G | Y | W | R | L | M | D | W | N | M | S | A | R | Q | L | V | S | F | I | E | E | H | L | D | L | G | V | T | T | V | D | H | A | D | I | Y | G | G | Y | Q | C | E | A | A | F | G | E | A | L | K | L | A | P | H | L | R | E | R | M | E | I | V |
Query Conservation |   |
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |
|
|
|   |   |
|
|   |
|   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
| . |   |
|
|   |   |
|
|   |
|
|
|
|   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |
|
|
|   |   |
|
|   |   |
|   |   | . | . | . |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
Template Sequence |   |
V | P | S | I | V | L | . |
N | D | G | N | S | I | P | Q | L | G | Y | G | V | F | K | V | . |
. |
. |
. |
. |
P | P | A | D | T | Q | R | A | V | E | E | A | L | E | V | G | Y | R | H | I | D | T | A | A | I | Y | G | N | E | E | G | V | . |
. |
. |
G | A | A | I | A | A | S | G | I | A | R | D | D | L | F | I | T |
Template Known Secondary structure |   |
|
|  |  |  |
| . | T | T | S |
|  |  |  | S | B |
|  |  |
|
| S |
| . | . | . | . | . |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
| G | G | G | T | T |
|
|  |  |  | . | . | . |  |  |  |  |  |  |  |
|
|
| G | G | G |
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
| . |
|
|
|
|  |  |
|  |  |  |  |  |
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | |
. | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | C | G | I | A | T | T | A | R | E | E | N | V | I | G | H | Y | I | T | D | R | D | H | I | I | K | S | A | E | Q | S | L | I | N | L | A | T | D | H | L | D | L | L | L | I | H | R | P | D | P | L | M | D | . |
A | D | E | V | A | D | A | F | K | H | L | H | Q | S | G | K | V | R | H | F | G | V | S | N | F |
Query Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|   |
|
|   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |   |
|
|   |
|   |   |
Template Sequence |   |
T | K | L | W | N | D | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | A | A | A | I | A | E | S | L | A | K | L | A | L | D | Q | V | D | L | Y | L | V | H | W | P | T | P | A | A | D | N | Y | V | H | A | W | E | K | M | I | E | L | R | A | A | G | L | T | R | S | I | G | V | S | N | H |
Template Known Secondary structure |   |
 |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |  |  |  |
|
|
|
| T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | A | Q | F | A | L | L | Q | S | R | L | P | F | T | L | A | T | N | Q | V | E | I | S | P | V | H | Q | P | L | L | L | D | G | T | L | D | Q | L | Q | Q | L | R | V | R | P | M | A | W | S | C | L | G | G | G | R | L | F | N | D | D | Y | F | Q | P | L | R | D | E | L | A | V | V | A | E | E | L | N | A | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |   |   | . |   |
Template Sequence |   |
L | V | P | H | L | E | R | I | V | A | A | T | G | V | V | P | A | V | N | Q | I | E | L | H | P | A | Y | Q | Q | R | E | . |
. |
. |
I | T | D | W | A | A | A | H | D | V | K | I | E | S | W | G | P | L | G | Q | G | K | Y | D | L | F | G | . |
. |
. |
. |
. |
A | E | P | V | T | A | A | A | A | A | H | G | . |
K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| S |  |  |  |  |  |
| B | T | T | B |
|
|  |  | . | . | . |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S | T | T | G | G | G | S | S |
|
| T | T | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  | T | . |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
| . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | |
|
|
. | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
200 | . | . | . | . | . | . | . | . | . | 210 | . | |
. |
  |
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | I | E | Q | V | V | Y | A | W | V | L | R | L | P | S | Q | P | L | P | I | I | G | S | G | K | I | E | R | V | R | A | A | V | E | A | E | T | L | K | M | T | R | Q | Q | W | F | R | I | R | K | A |
Query Conservation |   |
|   |
|
|   |
|
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |
| . | . |   |
|   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
Template Sequence |   |
T | P | A | Q | A | V | L | R | W | H | L | Q | K | G | F | V | . |
. |
V | F | P | K | S | V | R | R | E | R | L | E | E | N | L | D | V | F | D | F | D | L | T | D | T | E | I | A | A | I | D | A | M |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
| B | . | . | B |
|
|
|
|
| S |  |  |  |  |  |  |  |  |
|
| S | S |
|
|
|
|  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
|
. | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
  |