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Job DescriptionP76187
Confidence21.43%DateThu Jan 5 12:20:16 GMT 2012
Rank55Aligned Residues182
% Identity10%Templatec3obeB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_3400)2 from parabacteroides distasonis atcc 8503 at 1.70 a resolution
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50 .........60.........70.........80....
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Query Sequence  RFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVD. . . . . . . . . . . HADIYGGYQCEAAFGEALKLAPHLRERMEIVSKC
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Template Sequence  KXGLQTYSLGQE. . LLQDXPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNNTTFIASKDYKKXVDDAGLRISSSHLTPSL
Template Known Secondary structure 

GGGGT..TSTT



B
TTTS
B







B
TT
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   47..50........ .60.........70.........80.........90.........100.........110.........120....
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  GIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQ
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Template Sequence  REYTKENXPK. . . . . . . FDEFWKKATDIH. AELGVSCXVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN
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GGG........T
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   127..130...... ...140........ .150.........160.........170.........180.........190........
 
   165....170.........180.........190.........200.......
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Query Sequence  FALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPM
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Template Sequence  EFKRVLKAGEKPEQNPNPWAPPKGTYIEELFLKNTDPDKVXFE
Template Known Secondary structure  GGS

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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