Job Description P76187 Confidence 100.00% Date Thu Jan 5 12:20:16 GMT 2012 Rank 7 Aligned Residues 290 % Identity 26% Template c3n2tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of the glycerol dehydrogenase akr11b4 from gluconobacter2 oxydans Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		M	V	Q	R	I	T	I	A	P	Q	G	P	E	F	S	R	F	V	M	G	Y	W	R	L	M	D	.	.	.	W	N	M	S	A	R	Q	L	V	S	F	I	E	E	H	L	D	L	G	V	T	T	V	D	H	A	D	I	Y	G	G	Y	Q	C	E	A	A	F	G	E	A	L	K	L	A	P	H	L	R	E	R
Query Conservation																												.	.	.
Alig confidence																												.	.	.																																															.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		A	S	D	T	I	R	I	P	G	I	D	T	P	L	S	R	V	A	L	G	T	W	A	I	G	G	W	M	W	G	G	P	D	D	D	N	G	V	R	T	I	H	A	A	L	D	E	G	I	N	L	I	D	T	A	P	V	Y	G	F	G	H	S	E	E	I	V	G	R	A	L	A	E	K	P	.	.	.	N	K
Template Known Secondary structure		T	T	S					T	T		S	S				S						T	T	S	S		S	S	S		S	T	T														T	T								T	T	G	G	G	G													S		.	.	.
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		M	E	I	V	S	K	C	G	I	A	T	T	A	R	.	E	E	N	V	I	G	H	Y	I	T	D	R	D	H	I	I	K	S	A	E	Q	S	L	I	N	L	A	T	D	H	L	D	L	L	L	I	H	R	P	D	P	L	M	D	A	D	E	V	A	D	A	F	K	H	L	H	Q	S	G	K	V	R	H	F	G
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		A	H	V	A	T	K	L	G	L	H	W	V	G	E	D	E	K	N	M	K	V	F	R	D	S	R	P	A	R	I	R	K	E	V	E	D	S	L	R	R	L	R	V	E	T	I	D	L	E	Q	I	H	W	P	D	D	K	T	P	I	D	E	S	A	R	E	L	Q	K	L	H	Q	D	G	K	I	R	A	L	G
Template Known Secondary structure														S	S	S	T	T	T																								T		S	S							S	S			T	T	S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	N	F	T	P	A	Q	F	A	L	L	Q	S	R	L	P	F	T	L	A	T	N	Q	V	E	I	S	P	V	H	Q	P	L	L	L	D	G	T	L	D	Q	L	Q	Q	L	R	V	R	P	M	A	W	S	C	L	G	G	G	R	L	F	N	D	D	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.														.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.														.
Template Sequence		V	S	N	F	S	P	E	Q	M	D	I	F	R	E	V	A	P	L	A	T	.	.	I	Q	P	P	L	N	L	F	E	R	T	I	E	.	K	D	I	L	P	Y	A	E	K	H	N	A	V	V	L	A	Y	G	A	L	C	R	G	L	L	T	G	K	M	N	R	D	T	T	F	P	K	D	D	L	R	S	N	D
Template Known Secondary structure				S													S					.	.				B		B	T	T	B		G	G	G	.	G	T									T						B		T	T	G	G	G	G	G	G	T				T	T					T	T	S	G	G	G	G
Template Predicted Secondary structure																						.	.														.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
													224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	Q	P	L	R	D	E	L	A	V	V	A	E	E	L	N	A	G	S	I	E	Q	V	V	Y	A	W	V	L	R	L	P	S	Q	P	L	P	I	I	G	S	G	K	I	E	R	V	R	A	A	V	E	A	E	T	L	K	M	T	R	Q	Q	W	F	R	I	R	K	A	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																.																		.
Template Conservation																												.																		.
Template Sequence		P	K	F	Q	K	P	N	F	E	K	Y	L	A	A	M	D	E	F	E	K	L	A	E	K	R	G	.	K	S	V	M	A	F	A	V	R	W	V	L	D	Q	G	P	V	.	I	A	L	W	G	A	R	K	P	G	Q	V	S	G	V	K	D	V	F	G	W	S	L	T	D	E	E	K	K	A	V	D	D	I	L
Template Known Secondary structure		G	G	G	S	T	T																			T	T	.													T	T	T	T		.							S	S	G	G	G	G	T	T					S	S
Template Predicted Secondary structure																												.																		.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		293	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Y	D	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	H	V	P	N
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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