Job Description P76187 Confidence 13.58% Date Thu Jan 5 12:20:16 GMT 2012 Rank 83 Aligned Residues 194 % Identity 17% Template c3js3C_ PDB info PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.
Predicted Secondary structure												.	.																																									.																							.
Query SS confidence												.	.																																									.																							.
Query Sequence		M	V	Q	R	I	T	I	A	P	Q	.	.	G	P	E	F	S	R	F	V	M	G	Y	W	R	L	M	D	W	N	M	S	A	R	Q	L	V	S	F	I	E	E	H	L	D	L	G	V	T	T	V	D	.	H	A	D	I	Y	G	G	Y	Q	C	E	A	A	F	G	E	A	L	K	L	A	P	.	H	L	R	E
Query Conservation												.	.																																									.																							.
Alig confidence												.	.															.	.	.	.	.																						.																							.
Template Conservation																												.	.	.	.	.
Template Sequence		M	K	R	K	V	Q	V	K	N	I	T	I	G	E	G	R	P	K	I	C	V	P	I	I	G	K	.	.	.	.	.	N	K	K	D	I	I	K	E	A	K	E	L	K	D	A	C	L	D	I	I	E	W	R	V	D	F	F	E	N	V	E	N	I	K	E	V	K	E	V	L	Y	E	L	R	S	Y	I	H	D
Template Known Secondary structure									T	T				T	S	S	S										S	.	.	.	.	.	S											T	T	T	S	S		S						G	G	G		T	T	T	T																	T	T
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	E	I	V	S	K	C	G	I	A	T	T	A	R	E	E	N	V	I	G	H	Y	I	T	D	R	D	H	I	I	K	S	A	E	Q	S	L	I	N	L	A	T	D	H	L	D	L	L	L	I	H	R	P	D	P	L	M	D	A	D	E	V	A	D	A	F	K	H	L	H	Q	S	G	K	V	R	H	F	G
Query Conservation
Alig confidence								.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template Sequence		I	P	L	L	F	T	.	.	.	.	.	.	.	F	R	S	V	V	E	G	G	E	K	L	I	S	R	D	Y	Y	T	T	L	N	K	E	I	S	N	T	G	L	V	D	L	I	D	V	.	.	.	.	.	.	.	E	L	F	M	G	D	E	V	I	D	E	V	V	N	F	A	H	K	K	E	V	K	V	I	I
Template Known Secondary structure		S						.	.	.	.	.	.	.				G	G	G	T		S																		T	S			S					.	.	.	.	.	.	.		G	G	G															T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		157	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																											.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.																																											.	.	.	.
Query Sequence		V	S	N	F	T	.	.	.	.	.	.	.	.	.	P	A	Q	F	A	L	L	Q	S	R	L	P	F	T	L	A	T	N	Q	V	E	I	S	P	V	H	Q	P	L	L	L	D	G	T	L	D	Q	L	Q	Q	L	R	.	.	.	.	V	R	P	M	A	W	S	C	L	G	G
Query Conservation							.	.	.	.	.	.	.	.	.																																											.	.	.	.
Alig confidence		.					.	.	.	.	.	.	.	.	.																																											.	.	.	.
Template Conservation		.
Template Sequence		.	S	N	H	D	F	N	K	T	P	K	K	E	E	I	V	S	R	L	C	R	M	Q	E	L	G	A	D	L	P	K	I	A	V	M	P	Q	N	E	K	D	V	L	V	L	L	E	A	T	N	E	M	F	K	I	Y	A	D	R	P	I	I	T	M	S	M	S	G	M	G	V
Template Known Secondary structure		.					S	S																		T	T		S									S	S																	T	T		S	S		B						T	G	G	G	T
Template Predicted Secondary structure		.
Template SS confidence
			142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions