Job Description P76187 Confidence 41.74% Date Thu Jan 5 12:20:16 GMT 2012 Rank 45 Aligned Residues 161 % Identity 14% Template c3ezxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:monomethylamine corrinoid protein 1; PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein Resolution 2.56 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	S	A	R	Q	L	V	S	F	I	E	E	H	L	D	L	G	V	T	T	V	D	H	A	D	I	Y	G	G	Y	Q	C	E	A	A	F	G	E	A	L	K	L	A	P	H	L	R	E	R	M	E	I	V	S	K	C	G	I	A	T	T	A	R	E	E	N	V	I	G	H	Y	I	T	D	R	D	H	I	I
Query Conservation
Alig confidence																															.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	N	V	A	G	T	P	E	L	C	K	E	A	L	A	A	G	V	P	A	L	D	I	I	T	K	G	L	.	S	V	G	M	K	I	V	G	D	K	F	E	A	A	E	I	F	L	P	Q	I	M	M	S	G	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S
Template Known Secondary structure		T	T		T	T												T	T										T		.													T	T	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																						.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																			.	.																												.
Query SS confidence																			.	.																												.
Query Sequence		K	S	A	E	Q	S	L	I	N	L	A	T	D	H	L	D	L	.	.	L	L	I	H	R	P	D	P	L	M	D	A	D	E	V	A	D	A	F	K	H	L	H	Q	S	G	K	.	V	R	H	F	G	V	S	N	F	T	P	A	Q	F	A	L	L	Q	S	R	L	P	F	T	L	A	T	N	Q	V	E	I	S
Query Conservation																			.	.																												.
Alig confidence																			.	.																												.						.
Template Conservation																																																						.
Template Sequence		N	A	M	E	V	L	T	P	E	L	E	K	N	K	K	E	A	G	L	A	I	T	F	V	A	E	G	D	I	H	D	I	G	H	R	L	V	T	T	M	L	G	A	N	G	F	Q	I	V	D	L	G	.	V	D	V	L	N	E	N	V	V	E	E	A	A	K	H	K	G	E	K	V	L	L	V	G	S	A	L
Template Known Secondary structure												T	S	S													T	T																	T	S								.	S	S													T	T	T	S									S
Template Predicted Secondary structure																																																						.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		P	V	H	Q	P	L	L	L	D	G	T	L	D	Q	L	Q	Q	L	.	.	.	.	R	V	R	P	M	A	W	S	C
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.
Template Conservation
Template Sequence		M	T	T	S	M	L	G	Q	K	D	L	M	D	R	L	N	E	E	K	L	R	D	S	V	K	C	M	F	G	G	A
Template Known Secondary structure		S					T												T	T		G	G	G	S						S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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