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Job DescriptionP76187
Confidence100.00%DateThu Jan 5 12:20:16 GMT 2012
Rank11Aligned Residues269
% Identity21%Templatec1ynpA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:oxidoreductase; PDBTitle: aldo-keto reductase akr11c1 from bacillus halodurans (apo form)
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  VQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIV
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Template Sequence  MKKRQLGTSDLHVSELGFGCMSLGT. . . DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKAL. . . KGRRQDIILA
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TTSS
SB
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   1........10.........20..... ....30.........40.........50.........60.... .....70....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  SKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFT
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Template Sequence  TKV. . . . . . . . . . . . . . . . . SKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIR
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   75.. ..80.........90.........100.........110.........120.........130.......
 
   162.......170.........180.........190.........200.........210.........220 .........230...
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Query Sequence  PAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFND. . . . . . . . DYFQPLRDELAVV
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Template Sequence  PNVIKEYLKRSNIVS. . IMMQYSILDRRPEE. . WFPLIQEHGVSVVVRGPVARGLLSRRPLPEGEGYLNYRYDELKLLRE
Template Known Secondary structure  S


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BTTB
GGGG..GTT

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   153......160....... ..170.........180. ........190.........200.........210.........220........
 
   234.....240.........250.........260.........270........ .280.........290........
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Query Sequence  AEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAETL. KMTRQQWFRIRKAALGYDVP
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Template Sequence  SLPTD. RPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQKLAKAAVYE
Template Known Secondary structure  S
SS.S
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   229230... ......240.........250.........260.........270.........280.........290...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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