Job Description P76187 Confidence 100.00% Date Thu Jan 5 12:20:16 GMT 2012 Rank 31 Aligned Residues 264 % Identity 23% Template c1vbjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:prostaglandin f synthase; PDBTitle: the crystal structure of prostaglandin f synthase from2 trypanosoma brucei Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	Q	R	I	T	I	A	P	Q	G	P	E	F	S	R	F	V	M	G	Y	W	R	L	M	D	W	N	M	S	A	R	Q	L	V	S	F	I	E	E	H	L	D	L	G	V	T	T	V	D	H	A	D	I	Y	G	G	Y	Q	C	E	A	A	F	G	E	A	L	K	L	A	P	H	L	R	E	R	M	E	I
Query Conservation
Alig confidence									.																		.	.	.	.																																	.	.	.
Template Conservation									.																		.	.	.	.																																	.	.	.
Template Sequence		L	T	Q	S	L	K	L	.	S	N	G	V	M	M	P	V	L	G	F	G	M	W	K	L	Q	.	.	.	.	D	G	N	E	A	E	T	A	T	M	W	A	I	K	S	G	Y	R	H	I	D	T	A	A	I	Y	K	N	E	E	S	A	.	.	.	G	R	A	I	A	S	C	G	V	P	R	E	E	L	F	V
Template Known Secondary structure									.	T	T	S					S	B					T	T			.	.	.	.	T	T												T	T	T								G	G	G	T						.	.	.							S	S	S		G	G	G
Template Predicted Secondary structure									.																		.	.	.	.																																	.	.	.
Template SS confidence
		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	K	C	G	I	A	T	T	A	R	E	E	N	V	I	G	H	Y	I	T	D	R	D	H	I	I	K	S	A	E	Q	S	L	I	N	L	A	T	D	H	L	D	L	L	L	I	H	R	P	D	P	L	M	D	A	D	E	V	A	D	A	F	K	H	L	H	Q	S	G	K	V	R	H	F	G	V	S	N	F
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Sequence		T	T	K	L	W	.	.	.	.	.	.	.	.	.	.	.	.	N	S	D	Q	G	Y	E	S	T	L	S	A	F	E	K	S	I	K	K	L	G	L	E	Y	V	D	L	Y	L	I	H	W	P	G	.	K	D	K	F	I	D	T	W	K	A	F	E	K	L	Y	A	D	K	K	V	R	A	I	G	V	S	N	F
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	G	G	G		S															T	T		S								S			T	.	T	T	T														T	T	S								S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template SS confidence
		75	.	.	.	.													80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	A	Q	F	A	L	L	Q	S	R	L	P	F	T	L	A	T	N	Q	V	E	I	S	P	V	H	Q	P	L	L	L	D	G	T	L	D	Q	L	Q	Q	L	R	V	R	P	M	A	W	S	C	L	G	G	G	R	L	F	N	D	D	Y	F	Q	P	L	R	D	E	L	A	V	V	A	E	E	L	N	A	G
Query Conservation
Alig confidence																																	.	.	.																																.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.																																.	.	.	.	.	.	.	.
Template Sequence		H	E	H	H	I	E	E	L	L	K	H	C	K	V	A	P	M	V	N	Q	I	E	L	H	P	L	L	N	Q	K	A	.	.	.	L	C	E	Y	C	K	S	K	N	I	A	V	T	A	W	S	P	L	G	Q	G	H	L	V	E	D	A	R	L	K	A	.	.	.	.	.	.	.	.	I	G	G	K	Y	G	K
Template Known Secondary structure										T	T	S		S	S										B	T	T	B					.	.	.								T	T							S	T	T	G	G	G	T	S	T	T							.	.	.	.	.	.	.	.				T	T	T
Template Predicted Secondary structure																																	.	.	.																																.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.									.	.	.	.	.	.	210
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	E	Q	V	V	Y	A	W	V	L	R	L	P	S	Q	P	L	P	I	I	G	S	G	K	I	E	R	V	R	A	A	V	E	A	E	T	L	K	M	T	R	Q	Q	W	F	R	I	R	K	A	A	L	G	Y	D	V	P
Query Conservation
Alig confidence																		.	.
Template Conservation																		.	.
Template Sequence		T	A	A	Q	V	M	L	R	W	E	I	Q	A	G	V	I	.	.	T	I	P	K	S	G	N	E	A	R	I	K	E	N	G	N	I	F	D	F	E	L	T	A	E	D	I	Q	V	I	D	G	M	N	A	G	H	R	Y	G
Template Known Secondary structure														T	T			.	.						S												S	S													T	T						S	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions