Job Description Q9JMR3 Confidence 1.89% Date Thu Jan 5 12:37:47 GMT 2012 Rank 73 Aligned Residues 64 % Identity 17% Template c2q1fA_ PDB info PDB header:lyase Chain: A: PDB Molecule:chondroitinase; PDBTitle: crystal structure of chondroitin sulfate lyase abc from bacteroides2 thetaiotaomicron wal2926 Resolution 2.85 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.												.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.												.	.	.	.	.	.
Query Sequence		L	P	D	G	P	F	T	R	K	H	A	E	A	V	A	A	Q	Y	R	N	V	F	I	E	D	D	H	G	E	Q	F	.	.	.	.	.	.	R	L	V	V	R	N	N	G	A	M	V	.	.	.	.	.	.	W	R	T	W	N	F	E	D	G	A	G	Y	W	M	N	H	V	I	R	D	F	G
Query Conservation																																	.	.	.	.	.	.												.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		X	P	K	V	S	N	A	Q	E	R	K	I	A	K	R	L	V	E	N	G	F	R	A	E	P	D	P	Q	G	N	L	S	L	G	Y	G	C	V	S	V	Q	R	R	E	N	W	S	A	V	A	R	G	H	S	R	Y	L	W	A	A	E	H	Y	L	G	H	N	L	Y	G	R	Y	L	A	H	G
Template Known Secondary structure							S													T	T														T	T	T	T							T	T										S	S	S		S					T	T	B		S	S		T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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