Job Description P0ADM0 Confidence 9.39% Date Thu Jan 5 11:21:20 GMT 2012 Rank 11 Aligned Residues 89 % Identity 21% Template c2axtc_ PDB info PDB header:electron transport Chain: C: PDB Molecule:photosystem ii cp43 protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.																														.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure							.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	T	A	L	.	G	F	L	A	A	G	V	G	L	D	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	D	F	A	T	P	V	I	R	E	L	L	A	L	L	L	C	L	F	S	G	G	L	A	M	Y	G	Y	L	R	W	L
Query Conservation							.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	H	A	G	L	I	V	F	W	A	G	A	M	T	L	F	E	L	A	H	F	I	P	E	K	P	M	Y	E	Q	G	L	I	L	I	P	H	I	A	T	L	G	W	G	V	G	P	G	G	E	V	V	D	T	F	P	F	F	V	V	G	V	V	H	L	I	S	S	A	V	L	G	F	G	G	V	Y	H	A	I
Template Known Secondary structure																				T	T			T	T	S		S	G	G	G	T		S	S							T	T	S	S		T	G	G	G					S																									T	T
Template Predicted Secondary structure
Template SS confidence
		5055	.	.	.	.	5060	.	.	.	.	.	.	.	.	.	5070	.	.	.	.	.	.	.	.	.	5080	.	.	.	.	.	.	.	.	.	5090	.	.	.	.	.	.	.	.	.	5100	.	.	.	.	.	.	.	.	.	5110	.	.	.	.	.	.	.	.	.	5120	.	.	.	.	.	.	.	.	.	5130	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		R	N	E	K	A	M	R	L	K	E	D	.	.	.	.	.	.	L	P	Y	T	N	S	L	L	I	I	S	L	I	L	M	V	V	A	V	I	V	M	G	L	V	L	Y	A
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	P	E	T	L	E	E	Y	S	S	F	F	G	Y	D	W	K	D	K	N	K	M	T	T	I	L	G	F	H	L	I	V	L	G	I	G	A	L	L	L	V	A	K	A
Template Known Secondary structure		T	S		S			T	T	T		T	T	T				T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		5135	.	.	.	.	5140	.	.	.	.	.	.	.	.	.	5150	.	.	.	.	.	.	.	.	.	5160	.	.	.	.	.	.	.	.	.	5170	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions