 |
Job Description | P77187 | Confidence | 57.23% | Date | Thu Jan 5 12:26:10 GMT 2012 |
Rank | 187 | Aligned Residues | 74 |
% Identity | 16% | Template | d2auna2 |
SCOP info | Flavodoxin-like
| Class I glutamine amidotransferase-like
| LD-carboxypeptidase A N-terminal domain-like
|
Resolution | 2.40 |
|
 |
  |   |
408 | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | P | T | N | R | I | S | R | L | I | E | E | A | R | D | P | E | V | A | V | I | V | M | D | F | V | L | G | F | G | S | H | E | D | P | V | G | S | T | I | E | T | I | K | E | A | K | A | I | A | A | A | E | G | R | E | L | I | I | L | A | Y | V | L | G | T | D | L | D | T | P | S | L | E | Q | Q | S | Q | M | L |
Query Conservation |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|
|   |
|
|
|   |   |
|
|
|   |   |
|   |   |
|
|
|   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |
|
|   |   |
|   |   |
|
|   |
|   |
|
|   |   | . |   |
|
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |
|
|   |   |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|   |   |
|
|
Template Sequence |   |
T | V | E | Q | R | L | E | D | L | H | N | A | F | D | M | P | D | I | T | A | V | W | C | . |
L | R | G | G | Y | G | C | G | Q | L | L | P | G | L | D | W | G | R | L | E | A | A | . |
. |
. |
. |
. |
. |
. |
. |
S | P | R | P | L | I | G | F | . |
. |
. |
. |
. |
. |
. |
. |
S | D | I | S | V | L | L | S | A | F |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |  |  |  |  |  |  | . | S |
|
| S | S |
| G | G | G | G | G | G | G |
|
|  |  |  |  |  |  | S | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |
| . | . | . | . | . | . | . | . | G | G | G |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 110 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 120 | . | . | . | . |
  |
  |   |
488 | . | 490 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | A | G | V | I | L | A | S | S | S |
Query Conservation |   |
  |   |
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |
|
|
|
Template Sequence |   |
H | R | H | G | L | P | A | I | H | G | P |
Template Known Secondary structure |   |
 |  | T | T |
|
|  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|