Return to main results Retrieve Phyre Job Id

Job DescriptionP77187
Confidence92.64%DateThu Jan 5 12:26:10 GMT 2012
Rank96Aligned Residues94
% Identity12%Templatec3uuwB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:putative oxidoreductase with nad(p)-binding rossmann-fold PDBTitle: 1.63 angstrom resolution crystal structure of dehydrogenase (mvim)2 from clostridium difficile.
Resolution1.63 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70.........80.........90.........100.........110.........120.........130........
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  QAKNGDLMIVINGKSGADNEQLLVEIEELFNTKAQSGSHEARYATIGSAKKHIPESNLAVISVNGLFAAREARQALQNDL
Query Conservation   
   

 
                                   
   
    
  




 

         

   

Alig confidence 

























............











...


























Template Conservation         



 
         
   ............          
 ...   
 
 
      
          

Template Sequence  TKSERFEFVGAFTPNKVKREKICSDY. . . . . . . . . . . . RIMPFDSIESLA. . . KKCDCIFLHSSTETHYEIIKILLNLGV
Template Known Secondary structure  TS
SSS
S
............T

B
SS...TT
S


TT
Template Predicted Secondary structure 







............




...













Template SS confidence 















































































   24.....30.........40......... 50.........60. ........70.........80........
 
   139140... ......150.........160.......
Predicted Secondary structure 
.






Query SS confidence 




.























Query Sequence  NVMLF. SDNVSVEDELALKQLAHEKGLLMM
Query Conservation     
 .
      

  
   
   
 

 
Alig confidence 




.























Template Conservation   

 


 
    
   
       
    
Template Sequence  HVYVDKPLASTVSQGEELIELSTKKNLNLM
Template Known Secondary structure 
SSSSSST

Template Predicted Secondary structure 







Template SS confidence 





























   8990.........100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions