Return to main results Retrieve Phyre Job Id

Job DescriptionP77187
Confidence44.34%DateThu Jan 5 12:26:10 GMT 2012
Rank229Aligned Residues107
% Identity11%Templatec3ecsD_
PDB info PDB header:translationChain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130......... 140.........150.........160... ......170.........180.
Predicted Secondary structure 









.





..












Query SS confidence 


































.























. .

















Query Sequence  GSAKKHIPESNLAVISVNGLFAAREARQALQNDLN. VMLFSDNVSVEDELALKQLAHEKG. . LLMMGPDCGTAIINGAAL
Query Conservation    
    
  




 

         

   

 .  
 
      

  
   
   
.. 

 



 
 
      
Alig confidence 


































.























..

















Template Conservation    
   
  
  


   
 

   
  
    
 
 


 



  

   
  
   

 

 
 



   
  

 
Template Sequence  DLCHTFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKXAKALCHLNVPVTVVLDAAVGYIXEKADL
Template Known Secondary structure  TT

TT

S

TT




TTTTTTT


GGGGGG
S
Template Predicted Secondary structure 



























Template SS confidence 















































































   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   182...... .190.........200.........210.
Predicted Secondary structure 






.




Query SS confidence 






.






















Query Sequence  CFGNAVR. RGNIGIVGASGTGSQELSVRIHE
Query Conservation         . 
 







 
          
Alig confidence 






.






















Template Conservation 




  
  

 
 

 

  

  

   
Template Sequence  VIVGAEGVVENGGIINKIGTNQXAVCAKAQN
Template Known Secondary structure 

S
TTS
TTTT
Template Predicted Secondary structure 






Template SS confidence 






























   193......200.........210.........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions