Job Description P77187 Confidence 100.00% Date Thu Jan 5 12:26:10 GMT 2012 Rank 8 Aligned Residues 208 % Identity 25% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.																																								.
Query SS confidence																																									.																																								.
Query Sequence		Y	A	T	I	G	S	A	K	K	H	I	P	E	S	N	L	A	V	I	S	V	N	G	L	F	A	A	R	E	A	R	Q	A	L	Q	N	D	L	N	.	V	M	L	F	S	D	N	V	S	V	E	D	E	L	A	L	K	Q	L	A	H	E	K	G	L	L	M	M	G	P	D	C	G	T	A	I	I	N	G	.
Query Conservation																																									.																																								.
Alig confidence													.																												.																																								.
Template Conservation													.
Template Sequence		F	D	T	V	K	E	A	V	K	E	T	.	D	A	N	A	S	V	I	F	V	P	A	P	F	A	K	D	A	V	F	E	A	I	D	A	G	I	E	L	I	V	V	I	T	E	H	I	P	V	H	D	T	M	E	F	V	N	Y	A	E	D	V	G	V	K	I	I	G	P	N	T	P	G	I	A	S	P	K	V
Template Known Secondary structure			S	S									.																								T	T		S							S																		T						S	S							T	T	T
Template Predicted Secondary structure													.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
				179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	A	L	C	F	G	N	A	V	R	R	G	N	I	G	I	V	G	A	S	G	T	G	S	Q	E	L	S	V	R	I	H	E	F	G	G	G	V	S	Q	L	I	G	T	G	G	R	D	L	S	E	K	I	G	G	L	M	M	L	D	A	I	G	M	L	E	N	D	P	Q	T	E	I	I	A	L	I	S
Query Conservation		.	.
Alig confidence		.	.																																															.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		G	K	L	G	I	I	P	M	E	V	L	K	E	G	S	V	G	M	V	S	R	S	G	T	L	T	Y	E	I	A	H	Q	I	K	K	A	G	F	G	V	S	T	C	V	G	I	G	G	.	.	.	.	D	P	I	V	G	L	R	Y	K	E	V	L	D	L	F	E	K	D	D	E	T	E	A	I	V	M	I	G
Template Known Secondary structure									G	G	G											S		S													T	T											S	.	.	.	.	S	S	S		S	S											T		T	T		S
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		K	P	P	A	P	A	V	A	R	K	V	L	E	R	A	R	A	C	R	K	P	V	V	V	C	F	L	D	R	G	E	T	P	V	D	E	Q	G	L	Q	F	A	R	.	.	G	T	K	E	A	A	L	K	A	V	M	L	S	G	V
Query Conservation																																													.	.
Alig confidence								.																																					.	.
Template Conservation								.
Template Sequence		E	I	G	G	G	A	.	E	E	E	A	A	K	F	I	E	K	M	K	K	P	V	I	G	Y	I	A	G	Q	G	T	A	E	S	K	M	K	A	L	E	E	A	G	A	Y	V	A	K	N	I	S	D	I	P	K	L	L	A	G	I
Template Known Secondary structure			S	S	S	S		.									T	T		S	S																							T					S	S	T	T
Template Predicted Secondary structure								.
Template SS confidence
		214	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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