Job Description P77187 Confidence 95.30% Date Thu Jan 5 12:26:10 GMT 2012 Rank 84 Aligned Residues 107 % Identity 13% Template c2nvwB_ PDB info PDB header:transcription Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	L	E	Q	A	K	N	G	D	L	M	I	V	I	N	G	K	S	G	A	D	N	E	Q	L	L	V	E	I	E	E	L	F	N	T	K	A	Q	S	G	S	H	E	A	R	Y	A	T	I	G	S	A	K	K	H	I	P	E	S	N	L	A	V	I	S	V	N	G	L	F	A	A	R	E	A	R	Q	A	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.																			.
Template Conservation																																.	.	.	.	.	.	.	.	.																			.
Template Sequence		L	A	I	Q	Q	L	S	S	Q	F	Q	I	V	A	L	Y	N	P	T	L	K	S	S	L	Q	T	I	E	Q	L	.	.	.	.	.	.	.	.	.	Q	L	K	H	A	T	G	F	D	S	L	E	S	F	A	Q	Y	K	.	D	I	D	M	I	V	V	S	V	K	V	P	E	H	Y	E	V	V	K	N	I	L
Template Known Secondary structure							T	T	T	T									S	S											T	.	.	.	.	.	.	.	.	.	T		T	T					S									T	.	T		S						S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.										.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		135	.	.	.						.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.
Predicted Secondary structure						.	.	.	.	.						.	.																					.	.
Query SS confidence						.	.	.	.	.						.	.																					.	.
Query Sequence		Q	N	D	L	.	.	.	.	.	N	V	M	L	F	.	.	S	D	N	V	S	V	E	D	E	L	A	L	K	Q	L	A	H	E	K	G	.	.	L	L	M	M	G	P	D	C
Query Conservation						.	.	.	.	.						.	.																					.	.
Alig confidence						.	.	.	.	.						.	.																					.	.
Template Conservation
Template Sequence		E	H	S	S	Q	N	L	N	L	R	Y	L	Y	V	E	W	A	L	A	A	S	V	Q	Q	A	E	E	L	Y	S	I	S	Q	Q	R	A	N	L	Q	T	I	I	C	L	Q	G
Template Known Secondary structure			T	T	T	T		S	S								S	S	S	S	S	S													T		T	T								G	G
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions