Job Description P77187 Confidence 100.00% Date Thu Jan 5 12:26:10 GMT 2012 Rank 5 Aligned Residues 230 % Identity 24% Template c2fpgA_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [gdp-forming] alpha-chain, PDBTitle: crystal structure of pig gtp-specific succinyl-coa2 synthetase in complex with gdp Resolution 2.96 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.													.
Query SS confidence																																									.													.
Query Sequence		Y	A	T	I	G	S	A	K	K	H	I	P	E	S	N	L	A	V	I	S	V	N	G	L	F	A	A	R	E	A	R	Q	A	L	Q	N	D	L	N	.	V	M	L	F	S	D	N	V	S	V	E	D	.	E	L	A	L	K	Q	L	A	H	E	K	G	L	L	M	M	G	P	D	C	G	T	A	I	I	N	G
Query Conservation																																									.													.
Alig confidence														.																											.													.
Template Conservation														.
Template Sequence		F	N	T	V	K	E	A	K	E	Q	T	G	.	A	T	A	S	V	I	Y	V	P	P	P	F	A	A	A	A	I	N	E	A	I	D	A	E	V	P	L	V	V	C	I	T	E	G	I	P	Q	Q	D	M	V	R	V	K	H	R	L	L	R	Q	G	K	T	R	L	I	G	P	N	C	P	G	V	I	N	P	G
Template Known Secondary structure			S											.		S																					T	T		S							S																T		S	S						S	S	S						T	T
Template Predicted Secondary structure														.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
					179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	A	L	C	F	G	N	A	V	R	R	G	N	I	G	I	V	G	A	S	G	T	G	S	Q	E	L	S	V	R	I	H	E	F	G	G	G	V	S	Q	L	I	G	T	G	G	R	D	L	S	E	K	I	G	G	L	M	M	L	D	A	I	G	M	L	E	N	D	P	Q	T	E	I	I	A	L	I
Query Conservation		.	.	.
Alig confidence		.	.	.																																															.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		E	C	K	I	G	I	M	P	G	H	I	H	K	K	G	R	I	G	I	V	S	R	S	G	T	L	T	Y	E	A	V	H	Q	T	T	Q	V	G	L	G	Q	S	L	C	V	G	I	G	G	.	.	.	.	D	P	F	N	G	T	D	F	T	D	C	L	E	I	F	L	N	D	P	A	T	E	G	I	I	L	I
Template Known Secondary structure		T					S	S		G	G	G											S		S													T	T											S	.	.	.	.	S	S	S		S												T		T	T
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		256	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300							.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																																												.	.	.	.	.	.
Query SS confidence				.	.	.	.																																												.	.	.	.	.	.
Query Sequence		S	K	.	.	.	.	P	P	A	P	A	V	A	R	K	V	L	E	R	A	R	A	C	R	K	P	V	V	V	C	F	L	D	R	G	E	T	P	V	D	E	Q	G	L	Q	F	A	R	G	.	.	.	.	.	.	T	K	E	A	A	L	K	A	V	M	L	S	G	V	K	Q	E	N	L	D	L	H	T	L	N
Query Conservation				.	.	.	.																																												.	.	.	.	.	.
Alig confidence				.	.	.	.																																			.									.	.	.	.	.	.
Template Conservation																																										.
Template Sequence		G	E	I	G	G	N	A	E	E	N	A	A	E	F	L	K	Q	H	N	S	G	P	K	S	K	P	V	V	S	F	I	A	G	L	T	A	P	P	G	R	.	R	M	G	H	A	G	A	I	I	A	G	G	K	G	G	A	K	E	K	I	T	A	L	Q	S	A	G	V	V	V	S	M	S	P	A	Q	L	G	T
Template Known Secondary structure				S	S	S	S													S		S	S	S											T	T			T	T		.			S	S	T	T				B	T	T	B													T	T					S	S	G	G	G
Template Predicted Secondary structure																																										.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	L	I	A	D	V	R	A	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	Y	K	E	F	E	K	R	K	M
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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