Job Description P77187 Confidence 100.00% Date Thu Jan 5 12:26:10 GMT 2012 Rank 2 Aligned Residues 365 % Identity 16% Template c2csuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:457aa long hypothetical protein; PDBTitle: crystal structure of ph0766 from pyrococcus horikoshii ot3 Resolution 2.20 Å

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		108	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure								.																											.											.	.	.	.	.	.																													.	.
Query SS confidence								.																											.											.	.	.	.	.	.																													.	.
Query Sequence		K	K	H	I	P	E	.	S	N	L	A	V	I	S	V	N	G	L	F	A	A	R	E	A	R	Q	A	L	Q	N	D	L	N	.	V	M	L	F	S	D	N	V	S	V	.	.	.	.	.	.	E	D	E	L	A	L	K	Q	L	A	H	E	K	G	L	L	M	M	G	P	D	C	G	T	A	I	I	N	.	.
Query Conservation								.																											.											.	.	.	.	.	.																													.	.
Alig confidence								.																											.											.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		V	K	D	I	P	D	E	I	D	L	A	I	I	V	V	P	K	R	F	V	K	D	T	L	I	Q	C	G	E	K	G	V	K	G	V	V	I	I	T	A	G	F	G	E	T	G	E	E	G	K	R	E	E	K	E	L	V	E	I	A	H	K	Y	G	X	R	I	I	G	P	N	C	V	G	I	X	N	T	H	V
Template Known Secondary structure		T	T			S	S			S						S		G	G	G												T										S	S	G	G	G																		T	T						S	S	S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	L	C	F	G	N	A	V	R	R	G	N	I	G	I	V	G	A	S	G	T	G	S	Q	E	L	S	V	R	I	H	E	F	G	G	G	V	S	Q	L	I	G	T	G	G	R	D	L	S	E	K	I	G	G	L	M	M	L	D	A	I	G	M	L	E	N	D	P	Q	T	E	I	I	A	L	I	S	K
Query Conservation
Alig confidence																																																		.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		D	L	N	A	T	F	I	T	V	A	K	K	G	N	V	A	F	I	S	Q	S	G	A	L	G	A	G	I	V	Y	K	T	I	K	E	D	I	G	F	S	K	F	I	S	V	G	N	X	.	.	.	.	.	.	A	D	V	D	F	A	E	L	X	E	Y	L	A	D	T	E	E	D	K	A	I	A	L	Y	I	E
Template Known Secondary structure		T					S	S							S						S															T	T				S						T	T		.	.	.	.	.	.	S	S	S											T		S	S									S
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	A	P	A	V	A	R	K	V	L	E	R	A	R	A	C	R	K	P	V	V	V	C	F	L	D	R	G	E	T	P	V	D	E	Q	G	L	Q	F	A	R	G	T	K	E	A	A	L	K	A	V	M	L	S	G	V	K	Q	E	N	L	D	L	H	T	L	N	Q	P	L	I	A	D	V	R	A	R	L	Q
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	R	N	G	K	K	F	X	E	V	A	K	R	V	T	K	K	K	P	I	I	A	L	K	A	G	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	E	A	A	F	K	Q	S	G	V	L	V	A	N	T	I	D	E	X	L	S	X	A	R	A	F	S	Q	P	L	P	R	G
Template Known Secondary structure				S													T	T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T					S	S										G	G	G	S				S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240																		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	Q	K	Y	I	R	G	L	F	C	G	G	T	L	C	D	E	T	M	F	A	V	M	E	K	H	G	D	V	Y	S	N	I	Q	P	D	P	E	F	R	L	K	D	I	N	R	S	I	K	H	T	F	L	D	F	G	D	D	D	F	T	N	G	K	P	H	P	M	I	D	P	T	N	R	I	S	R	L	I
Query Conservation
Alig confidence																																												.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	V	A	I	X	T	N	A	G	G	P	G	V	L	T	A	D	E	L	D	K	R	G	L	K	L	A	T	L	E	E	K	T	I	E	E	L	R	S	F	L	.	.	P	P	X	A	A	V	K	N	P	V	D	X	I	A	S	A	.	.	.	.	.	.	.	.	.	.	R	G	E	D	Y	Y	R	T	A	K
Template Known Secondary structure									S													T	T	T	T																		S	.	.		T	T				S	S						T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.											.	.	.	.	.	.	.	.	360	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	R	D	P	E	V	A	V	I	V	M	D	F	V	L	G	F	G	S	H	E	D	P	V	G	S	T	I	E	T	I	K	E	A	K	A	I	A	A	A	E	G	R	E	L	I	I	L	A	Y	V	L	G	T	D	L	D	T	P	S	L	E	Q	Q	S	Q	M	L	L	D	A	G	V	I	L	A	S	S
Query Conservation
Alig confidence																										.	.	.	.																																.	.	.	.
Template Conservation																										.	.	.	.																																.	.	.	.
Template Sequence		L	L	L	Q	D	P	N	V	D	X	L	I	A	I	C	V	V	P	T	F	A	G	X	T	.	.	.	.	L	T	E	H	A	E	G	I	I	R	A	V	K	E	V	N	N	E	K	P	V	L	A	X	F	X	A	G	Y	V	S	.	.	.	.	E	K	A	K	E	L	L	E	K	N	G	I	P	T	Y	E	R
Template Known Secondary structure							T	T		S											S	T	T			.	.	.	.	S	S																														.	.	.	.										T	T					S	S
Template Predicted Secondary structure																										.	.	.	.																																.	.	.	.
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.					.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.					.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	N	T	G	L	L	A	R	E	F	I	C	K	G	E	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	D	V	A	S	A	A	Y	A	L	V	E	Q	A	K	N	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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