Job Description P77187 Confidence 49.59% Date Thu Jan 5 12:26:10 GMT 2012 Rank 205 Aligned Residues 164 % Identity 10% Template c1w96B_ PDB info PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a Resolution 1.8 Å

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		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.													.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	K	Q	E	N	L	D	L	H	T	L	N	Q	P	L	I	A	D	V	R	A	R	L	Q	P	Q	Q	K	Y	I	R	G	L	F	C	G	G	T	L	C	D	E	T	M	F	A	V	M	E	K	.	.	.	.	.	.	.	.	.	.	.	.	H	G	D	V	Y	S	N	I	Q	P	D	P	E	F	R	L	K
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	N	T	V	D	K	L	E	E	S	P	L	R	D	F	V	K	S	H	G	G	H	T	V	I	S	K	I	L	I	A	N	N	G	I	A	A	V	K	E	I	R	S	V	R	K	W	A	Y	E	T	F	G	D	D	R	T	V	Q	F	V	A	M	A	T	P	E	D	L	E	A	N	A	E	Y	I	R	M	A
Template Known Secondary structure			S	S	B	T	T	T	S												T	T		S	B																														S		T	T	S	S													T	T							S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		381	.	.	.	.	.	.	.	.	390						.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		D	I	N	R	S	I	K	H	T	F	.	.	.	.	.	L	D	F	G	D	D	D	F	T	N	G	K	P	H	P	M	I	D	P	T	N	R	I	S	R	L	I	E	E	A	R	D	P	E	V	A	V	I	V	M	D	F	V	L	G	F	G	S	H	E	D	P	V	G	S	T	I	E	T	I	K	E	A	K	A
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.											.	.	.	.	.	.	.	.
Template Sequence		D	Q	Y	I	E	V	P	G	G	T	N	N	N	N	Y	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	L	I	V	D	I	A	E	R	A	D	V	D	A	V	W	.	.	.	.	A	G	W	G	H	A	S	E	N	P	.	.	.	.	.	.	.	.	L	L	P	E
Template Known Secondary structure		S								S	S	G	G	G	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T		S				.	.	.	.			S	S	T	T	T	T		T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.									.	.	160	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.																																.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	A	A	E	G	R	E	L	I	I	L	A	Y	V	L	G	T	D	L	D	T	P	S	L	E	Q	Q	S	Q	M	L	L	D	A	G	V	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	S	S	T	N	T	G	L	L
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	S	Q	S	K	R	K	V	I	F	I	G	P	P	G	N	A	M	R	S	L	G	D	K	I	S	S	T	I	V	A	Q	S	A	K	V	P	C	I	P	W	S	G	T	G	V	D	T	V	H	V	D	E	K	T	G	L	V	S	V	D	D	D	I	Y	Q	K	G	C	C	T	S	P	E	D	G	L	Q	K
Template Known Secondary structure						S	T	T					S	S									S		S											T	T			B			B	T	T	T	T								T	T	T											G	G	G	S		S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		505	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	E	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions