Job Description P77187 Confidence 100.00% Date Thu Jan 5 12:26:10 GMT 2012 Rank 7 Aligned Residues 213 % Identity 24% Template c1oi7A_ PDB info PDB header:synthetase Chain: A: PDB Molecule:succinyl-coa synthetase alpha chain; PDBTitle: the crystal structure of succinyl-coa synthetase alpha2 subunit from thermus thermophilus Resolution 1.23 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.																																								.
Query SS confidence																																									.																																								.
Query Sequence		Y	A	T	I	G	S	A	K	K	H	I	P	E	S	N	L	A	V	I	S	V	N	G	L	F	A	A	R	E	A	R	Q	A	L	Q	N	D	L	N	.	V	M	L	F	S	D	N	V	S	V	E	D	E	L	A	L	K	Q	L	A	H	E	K	G	L	L	M	M	G	P	D	C	G	T	A	I	I	N	G	.
Query Conservation																																									.																																								.
Alig confidence													.																												.																																								.
Template Conservation													.
Template Sequence		Y	D	T	V	K	E	A	V	A	H	H	.	E	V	D	A	S	I	I	F	V	P	A	P	A	A	A	D	A	A	L	E	A	A	H	A	G	I	P	L	I	V	L	I	T	E	G	I	P	T	L	D	M	V	R	A	V	E	E	I	K	A	L	G	S	R	L	I	G	G	N	C	P	G	I	I	S	A	E	E
Template Known Secondary structure			S	S								S	.			S																					T	T		S							S																		T						S	S	S						T	T	T
Template Predicted Secondary structure													.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
				179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	A	L	C	F	G	N	A	V	R	R	G	N	I	G	I	V	G	A	S	G	T	G	S	Q	E	L	S	V	R	I	H	E	F	G	G	G	V	S	Q	L	I	G	T	G	G	R	D	L	S	E	K	I	G	G	L	M	M	L	D	A	I	G	M	L	E	N	D	P	Q	T	E	I	I	A	L	I	S
Query Conservation		.	.
Alig confidence		.	.																																																		.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		T	K	I	G	I	M	P	G	H	V	F	K	R	G	R	V	G	I	I	S	R	S	G	T	L	T	Y	E	A	A	A	A	L	S	Q	A	G	L	G	T	T	T	T	V	G	I	G	G	D	P	V	.	.	.	.	I	G	T	T	F	K	D	L	L	P	L	F	N	E	D	P	E	T	E	A	V	V	L	I	G
Template Known Secondary structure						S	S		G	G	G											S															T	T											S	S	S		.	.	.	.		S	S											T		T	T
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	P	A	P	A	V	A	R	K	V	L	E	R	A	R	A	C	R	K	P	V	V	V	C	F	L	D	R	G	E	T	P	V	D	E	Q	G	L	Q	F	A	R	G	T	K	E	A	A	L	K	A	V	M	L	S	G	V	K	Q	E	N	L	D	L	H	T	L	N	Q	P	L	I	A	D
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	G	G	S	D	E	E	E	A	A	A	W	V	K	D	H	M	K	K	P	V	V	G	F	I	G	G	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	P	E	S	K	L	R	A	F	A	E	A	G	I	P	V	A	D	T	I	D	E	I	V	E	L	V	K	K	A	L
Template Known Secondary structure			S	S	S	S															S							S				.	.	.	.	.	.	.	.	.	.	.	.	.		S												T			B		S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.														.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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