 |
Job Description | P15639 | Confidence | 50.18% | Date | Thu Jan 5 11:34:47 GMT 2012 |
Rank | 51 | Aligned Residues | 79 |
% Identity | 19% | Template | d2b3za2 |
SCOP info | Cytidine deaminase-like
| Cytidine deaminase-like
| Deoxycytidylate deaminase-like
|
Resolution | 2.41 |
|
 |
  |   |
415 | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | |
|
|
. | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | |
. | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | |
|
|
|
|
|
. | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
Query Sequence |   |
R | D | A | L | F | C | W | K | V | A | K | F | V | K | S | N | . |
. |
. |
A | I | V | Y | A | K | N | N | M | T | I | G | I | G | A | G | Q | M | S | R | . |
V | Y | S | A | K | I | A | G | I | K | A | A | D | E | G | L | E | V | K | G | S | S | M | A | S | D | A | F | F | P | F | . |
. |
. |
. |
. |
. |
R | D | G |
Query Conservation |   |
  |
|
|   |
|
|
|   |
|   |
|   |
|
|
|
| . | . | . |
|
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|
| . |
|
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |   |
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
| . | . | . |   |   |   |
|   |   |   |
|
|
|   | . |
|
|
|
|
|   |
|   |   |   |   |
|   |
|
Template Sequence |   |
L | A | L | D | L | A | K | Q | G | E | G | Q | T | E | S | N | P | L | V | G | A | V | V | V | K | D | G | Q | I | V | G | M | G | A | H | L | K | Y | G | E | A | H | A | E | V | H | A | I | H | M | A | . |
. |
. |
G | A | H | A | E | G | A | D | I | Y | V | . |
T | L | E | P | C | S | H | Y | G | K | T | P | P | C |
Template Known Secondary structure |   |
 |  |  |  |  |  | G | G | G | T | T | S | S | T | T | S |
|
|
|  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |
|
| S | T | T | S |
|
|  |  |  |  |  |  |  |  |  | . | . | . | G | G | G | G | T | T |
|  |  |  |  | . | S | S |
|
|
|
|
|
| S | S | S |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |
|
|
|
|  |  |  |  | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
. | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
485 | . | . | . | . | 490 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | A | A | A | A | A | G | V | T | C | V | I |
Query Conservation |   |
|
|   |
|
|   |   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|
|
|   |
|
|
|
Template Sequence |   |
A | E | L | I | I | N | S | G | I | K | R | V | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|