Return to main results Retrieve Phyre Job Id

Job DescriptionP15639
Confidence98.31%DateThu Jan 5 11:34:47 GMT 2012
Rank12Aligned Residues110
% Identity23%Templated1wo8a1
SCOP infoMethylglyoxal synthase-like Methylglyoxal synthase-like Methylglyoxal synthase, MgsA
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30 .........40....... ..50.........60.........70.........80.........90.
Predicted Secondary structure 



..


.

















Query SS confidence 















. .
















.











































Query Sequence  SDKAGIVEFAQALSAR. . GVELLSTGGTARLLAEK. GLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIME
Query Conservation 





   
  
   ..
 









 
   .

 
  

  




 
 







 








      
 
Alig confidence 















..
















.










.....



.....








..........
Template Conservation    
  
   
     

 
  
 

 

   
 
  

 
  
    ..... 


.....  
   
  ..........
Template Sequence  AKKDEMVAFCLRHKDVLARYPLLATGTTGARIQEATGLAVERVLSGP. . . . . LGGD. . . . . LQIGARVAE. . . . . . . . . .
Template Known Secondary structure  GGTTTS








TT.....TT.....T..........
Template Predicted Secondary structure 









.....



.....
..........
Template SS confidence 















































































   11........20.........30.........40.........50....... ..60. ........70
 
   92.......100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 
























Query SS confidence 







































































Query Sequence  EHQIQPIDMVVVNLYPFAQTVAREGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEMDDN
Query Conservation     
  










  

       
  

















   
 

 

 

  
  

  
Alig confidence  ....














...


..........












..





















Template Conservation  ....
 
  


  

   ...   ..........  
   
 
 
  ..  

  

  

  

  
  
Template Sequence  . . . . GKVLAVVFLQDPLTA. . . KPH. . . . . . . . . . EPDVQALMRVCNV. . HGVPLATNLVAAEALIAWIRKG
Template Known Secondary structure  ....T


TTS
...
TT............TT


ST
Template Predicted Secondary structure  ....









...


..........
..





Template SS confidence 







































































   71........80..... ... .90.........100. ........110.........120...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions