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Job DescriptionP15639
Confidence100.00%DateThu Jan 5 11:34:47 GMT 2012
Rank1Aligned Residues511
% Identity46%Templatec4a1oB_
PDB info PDB header:transferase-hydrolaseChain: B: PDB Molecule:bifunctional purine biosynthesis protein purh; PDBTitle: crystal structure of mycobacterium tuberculosis purh complexed with2 aicar and a novel nucleotide cfair, at 2.48 a resolution.
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  RRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLLAEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRR
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Template Sequence  RRPIRRALISVYDKTGLVDLAQGLSAAGVEIISTGSTAKTIADTGIPVTPVEQLTGFPEVLDGRVKTLHPRVHAGLLADL
Template Known Secondary structure 
B


SS
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TTT







GGGTTTT
S

T
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   84.... .90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  GQDDA. . IMEEHQIQPIDMVVVNLYPFAQTVAREGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEMD
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Template Sequence  RKSEHAAALEQLGIEAFELVVVNLYPFSQTV. ESGASVDDCVEQIDIGGPAMVRAAAKNHPSAAVVTDPLGYHGVLAALR
Template Known Secondary structure  TST



S


G.GG


T

STTTT

SGGG
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   87..90.........100.........110....... ..120.........130.........140.........150.........160.....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  DNEGSLTLATRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNLNFIKKLDMRYGENSHQQAAFYIE
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Template Sequence  A. . GGFTLAERKRLASLAFQHIAEYDIAVASWMQQTLAPEHP. . . . . VAAFPQWFGRSWRRVAMLRYGENPHQQAALYGD
Template Known Secondary structure  T..TSB
TTS

SS.....

SS
S






S
SSSTTS


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   166 ...170.........180.........190.........200..... ....210.........220.........230........
 
   242.......250.........260.........270.........280.........290........ .300.........310.........320
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Query Sequence  ENVKEASVATATQVQGKALSYNNIADTDAALECVKEFAEPACVIVKHANPCGVAIGN. SILDAYDRAYKTDPTSAFGGII
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Template Sequence  PTA. WPGLAQAEQLHGKDMSYNNFTDADAAWRAAFDHEQTCVAIIKHANPCGIAISSVSVADAHRKAHECDPLSAYGGVI
Template Known Secondary structure  SSS.


GGG
SS


T
SSTTSS

TT
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   239240. ........250.........260.........270.........280.........290.........300.........310.......
 
   321........330.........340.........350.........360.........370.........380.........390...... .
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Query Sequence  AFNRELDAETAQAIISRQFVEVIIAPSASEEALKITAAKQNVRVLTCGQWGERVPGLDFKRVNGGLLVQDRDLGMV. . . G
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Template Sequence  AANTEVSVEMAEY. VSTIFTEVIVAPGYAPGALDVLARKKNIRVLVAAEPLA. . GGSELRPISGGLLIQQSDQLDAHGDN
Template Known Secondary structure  SS
B
.TTS
S
B
TTTTSSS





S..S
TT


S
SGGGS
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   318.320.........330 .........340.........350.........360........ .370.........380.........390....
 
   398.400.........410.........420.........430.........440.........450.........460.........470.......
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Query Sequence  AEELRVVTKRQPSEQELRDALFCWKVAKFVKSNAIVYAKNNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVKGSSMASDA
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Template Sequence  PANWTLATGSPADPATLTDLVFAWRACRAVKSNAIVIAADGATVGVGMGQVNRVDAARLAVERG. . . GERVRGAVAASDA
Template Known Secondary structure  GGG
SS


TTTS
SS
TT
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SS...GGGGTT
SS
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   395....400.........410.........420.........430.........440.........450........ .460.........470.
 
   478.480.........490.........500.........510.........520.........
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Query Sequence  FFPFRDGIDAAAAAGVTCVIQPGGSIRDDEVIAAADEHGIAMLFTDMRHFRH
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Template Sequence  FFPFPDGLETLAAAGVTAVVHPGGSVRDEEVTEAAAKAGVTLYLTGARHFAH
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TTT

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   472.......480.........490.........500.........510.........520...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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