 |
Job Description | P15639 | Confidence | 28.86% | Date | Thu Jan 5 11:34:47 GMT 2012 |
Rank | 103 | Aligned Residues | 55 |
% Identity | 20% | Template | c3u57A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:raucaffricine-o-beta-d-glucosidase; |
PDBTitle: structures of alkaloid biosynthetic glucosidases decode substrate2 specificity
|
Resolution | 2.43 Å |
|
 |
  |   |
474 | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 500 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | S | D | A | F | F | P | F | R | D | G | I | D | A | A | A | A | A | G | V | T | C | V | . |
. |
. |
. |
. |
. |
. |
. |
I | Q | P | G | G | S | I | R | D | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | V | I | A | A | A | D | E | H | G | I | A | M | L | F | T | D | M | R | H | F | R | H |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|
|   |   |
|
|   |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . |
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|
|   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |
|   |   |   |
|
|   |
|
|
|
| . |
|   |
|
|
|
|
Template Sequence |   |
A | V | D | S | Y | H | L | Y | K | E | D | V | N | I | L | K | N | L | G | L | D | A | Y | R | F | S | I | S | W | S | R | V | L | P | G | G | R | L | S | G | G | V | N | K | E | G | I | N | Y | Y | N | N | L | I | D | G | L | L | A | N | G | I | K | P | F | V | T | . |
L | F | H | W | D | V |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|
|  |  |  |  | S | T | T | S | S | G | G | G |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | . |  |  | S | S |
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
. | . | 140 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|