Job Description P15639 Confidence 40.68% Date Thu Jan 5 11:34:47 GMT 2012 Rank 64 Aligned Residues 78 % Identity 10% Template c3sajB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:glutamate receptor 1; PDBTitle: crystal structure of glutamate receptor glua1 amino terminal domain Resolution 2.50 Å

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		440	.	.	.	.						.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.							.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.																																											.	.	.	.	.	.
Query SS confidence							.	.	.	.	.																																											.	.	.	.	.	.
Query Sequence		T	I	G	I	G	.	.	.	.	.	A	G	Q	M	S	R	V	Y	S	A	K	I	A	G	I	K	A	A	D	E	G	L	E	V	K	G	S	S	M	A	S	D	A	F	F	P	F	R	D	G	I	D	.	.	.	.	.	.	A	A	A	A	A	G	V	T	C	V	I	Q	P	G	G	S	I	R	D	D	E	V
Query Conservation							.	.	.	.	.																																											.	.	.	.	.	.
Alig confidence							.	.	.	.	.								.																						.	.	.	.	.									.	.	.	.	.	.
Template Conservation																			.																						.	.	.	.	.
Template Sequence		N	I	Q	I	G	G	L	F	P	N	Q	Q	S	Q	E	H	A	.	A	F	R	F	A	L	S	Q	L	T	E	P	P	K	L	L	P	Q	I	D	I	.	.	.	.	.	V	N	I	S	D	S	F	E	M	T	Y	R	F	C	S	Q	F	S	K	G	V	Y	A	I	F	G	F	Y	E	R	R	T	V	N	M	L
Template Known Secondary structure										S	S	S	S						.								T			S	S	S									.	.	.	.	.			T	T																T		S								T	T	T
Template Predicted Secondary structure																			.																						.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	A	D	E	H	G	I	A	M	L	F	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	F	C	G	A	L	H	V	C	F	I	T	P	S
Template Known Secondary structure									T							S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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