 |
Job Description | P15639 | Confidence | 23.29% | Date | Thu Jan 5 11:34:47 GMT 2012 |
Rank | 128 | Aligned Residues | 89 |
% Identity | 19% | Template | c3iaaB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:calg2; |
PDBTitle: crystal structure of calg2, calicheamicin glycosyltransferase, tdp2 bound form
|
Resolution | 2.50 Å |
|
 |
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | E | F | A | Q | A | L | S | A | R | G | . |
. |
V | E | L | L | S | T | G | G | T | A | R | L | L | A | E | K | G | L | P | V | T | E | V | S | . |
. |
D | Y | T | G | F | P | E | M | M | D | G | R | V | K | T | L | H | P | K | V | H | G | G | I | L | G | R | R | G | Q | D | D | A | I | M | E | E | H | Q | I |
Query Conservation |   |
|   |   |   |
|   |   |
|   |   |   |
| . | . |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|
|   |
|   |   |
|
| . | . |   |   |
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |   |
|   |   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | L | T | V | V | T | E | L | V | R | R | G | H | R | V | S | Y | V | T | A | G | G | F | A | E | P | V | R | A | A | G | A | T | V | V | P | Y | Q | S | E | I | I | D | A | D | A | A | E | V | F | G | S | D | D | L | G | V | R | P | H | L | X | Y | L | R | E | N | V | S | V | L | R | A | T | A | E | A | L | D | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
|
| S | G | G | G |
|
|  |  |  |  | T | T | S |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | I | D | M | V | V | V | N | L | Y | P | F |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
D | V | P | D | L | V | L | Y | D | D | F | P | F |
Template Known Secondary structure |   |
S |
|
| S |  |  |  |  |  | S | T | T |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|