Return to main results Retrieve Phyre Job Id

Job DescriptionP15639
Confidence82.64%DateThu Jan 5 11:34:47 GMT 2012
Rank20Aligned Residues43
% Identity14%Templatec2q5cA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum
Resolution1.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40....... ..50....
Predicted Secondary structure 






.

Query SS confidence 



































.






Query Sequence  LSVSDKAGIVEFAQALSARGVELLSTGGTARLLAEK. GLPVTEV
Query Conservation 








   
  
   
 









 
   .

 
  
Alig confidence 



































.






Template Conservation 
    
      
     
 






 

  

    





Template Sequence  TKTASLTRASKIAFGLQDEVDAIISRGATSDYIKKSVSIPSISI
Template Known Secondary structure 

TTT
STT
SS
Template Predicted Secondary structure 








Template SS confidence 











































   31........40.........50.........60.........70....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions