Job Description P40719 Confidence 98.10% Date Wed Jan 25 15:20:54 GMT 2012 Rank 48 Aligned Residues 149 % Identity 6% Template c3lnrA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:aerotaxis transducer aer2; PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2 Resolution 2.64 Å

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		177	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		I	M	M	V	L	L	G	R	E	L	.	A	P	L	N	K	L	A	L	A	L	R	M	R	D	P	D	S	E	K	P	L	N	A	T	G	V	P	S	E	V	R	P	L	V	E	S	L	N	Q	L	F	A	R	T	H	A	M	M	V	R	E	R	R	F	T	S	D	A	A	H	E	L	R	S	P	L	T	A	L
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		M	G	L	F	N	A	H	A	V	A	Q	Q	R	A	D	R	I	A	T	L	L	Q	S	F	A	D	G	Q	L	D	T	A	V	G	E	A	P	A	P	G	Y	E	R	L	Y	D	S	L	R	A	L	Q	R	Q	L	R	E	Q	R	A	E	L	Q	Q	V	E	S	L	E	A	G	L	A	E	M	S	R	Q	H	E
Template Known Secondary structure																											T	T			S	S						S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.							.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.
Query Sequence		K	V	Q	T	E	V	A	Q	L	S	D	D	D	P	Q	A	R	K	K	A	L	L	Q	L	H	S	G	I	D	R	A	T	R	L	V	D	Q	L	L	T	L	S	R	.	.	.	.	.	.	L	D	S	L	D	N	L	Q	D	V	A	E	I	P	L	E	D	L	L	Q	S	S	V	M	D	I	Y
Query Conservation																																													.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	W	I	D	Q	T	I	P	A	E	R	L	E	G	R	A	A	R	I	A	K	G	V	N	E	L	V	A	A	H	I	A	V	K	M	K	V	V	S	V	V	T	A	Y	G	Q	G	N	F	E	P	L	M	D	R	L	P	G	K	K	A	Q	I	T	E	A	I	D	G	V	R	E	R	L	R
Template Known Secondary structure		T	T		T	T					G	G	G			T																																T	S											G	G	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions