Job Description P40719 Confidence 98.68% Date Wed Jan 25 15:20:54 GMT 2012 Rank 36 Aligned Residues 90 % Identity 19% Template c3h4lB_ PDB info PDB header:dna binding protein, protein binding Chain: B: PDB Molecule:dna mismatch repair protein pms1; PDBTitle: crystal structure of n terminal domain of a dna repair protein Resolution 2.50 Å

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380				.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.										.	.	.	.	.	.	.	.	420
Predicted Secondary structure																														.	.	.																																.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.																																.	.	.	.	.	.	.	.	.
Query Sequence		L	S	L	L	V	R	N	L	L	D	N	A	V	R	Y	S	P	Q	G	S	V	V	D	V	T	L	N	A	.	.	.	D	N	F	I	V	R	D	N	G	P	G	V	T	P	E	A	L	A	R	I	G	E	R	F	Y	R	P	P	G	Q	T	.	.	.	.	.	.	.	.	.	A	T	G	S	G	L	G	L	S
Query Conservation																														.	.	.																																.	.	.	.	.	.	.	.	.
Alig confidence																				.	.									.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		L	T	T	A	V	K	E	L	V	D	N	S	I	D	A	N	A	N	.	.	Q	I	E	I	I	F	K	D	Y	G	L	E	S	I	E	C	S	D	N	G	D	G	I	D	P	S	N	Y	E	F	L	A	L	K	H	Y	T	S	K	I	A	K	F	Q	D	V	A	K	V	Q	T	L	G	F	R	G	E	A	L	S
Template Known Secondary structure																T	T		S	.	.								G	G	G	T	S								S					T	T	T	G	G	G	S	S									T	T	S	S						T	T	S	S			S	S
Template Predicted Secondary structure																				.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	Q	R	I	A	K	L	H	G	M	N	V	E	F	G	N	A	E	Q	G	G	F	E	A	K	V	S	W
Query Conservation
Alig confidence							.	.	.	.	.
Template Conservation							.	.	.	.	.
Template Sequence		S	L	C	G	I	.	.	.	.	.	A	K	L	S	V	I	T	T	T	S	P	P	K	A	D	K	L	E	Y
Template Known Secondary structure						S	.	.	.	.	.	S								S	S	T	T
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		133	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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