Job Description P40719 Confidence 99.64% Date Wed Jan 25 15:20:54 GMT 2012 Rank 25 Aligned Residues 97 % Identity 20% Template c2zbkB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms Resolution 3.56 Å

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.								.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.				.	410	.	.	.	.	.		.	.	.
Predicted Secondary structure																						.	.	.											.	.	.	.	.	.	.																											.	.	.								.
Query SS confidence																						.	.	.											.	.	.	.	.	.	.																											.	.	.								.
Query Sequence		L	S	L	L	V	R	N	L	L	D	N	A	V	R	Y	S	P	Q	G	S	.	.	.	V	V	D	V	T	L	N	A	D	N	.	.	.	.	.	.	.	F	I	V	R	D	N	G	P	G	V	T	P	E	A	L	A	R	I	G	E	R	F	Y	R	P	P	.	.	.	G	Q	T	A	T	G	S	.	G	L	G
Query Conservation																						.	.	.											.	.	.	.	.	.	.																											.	.	.								.
Alig confidence																						.	.	.											.	.	.	.	.	.	.																											.	.	.								.
Template Conservation
Template Sequence		L	Y	Q	T	V	R	E	L	I	E	N	S	L	D	A	T	D	V	H	G	I	L	P	N	I	K	I	T	I	D	L	I	D	D	A	R	Q	I	Y	K	V	N	V	V	D	N	G	I	G	I	P	P	Q	E	V	P	N	A	F	G	R	V	L	Y	S	S	K	Y	V	N	R	Q	T	R	G	M	Y	G	L	G
Template Known Secondary structure															T	T	T	T	T	T	T														T	T	T	T										S					G	G	G	S					T	S				S						S			S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.								.
Query SS confidence																.								.
Query Sequence		L	S	I	V	Q	R	I	A	K	L	H	G	M	N	.	V	E	F	G	N	A	E	.	Q	G	G	F	E	A	K	V	S	W
Query Conservation																.								.
Alig confidence																.								.
Template Conservation
Template Sequence		V	K	A	A	V	L	Y	S	Q	M	H	Q	D	K	P	I	E	I	E	T	S	P	V	N	S	K	R	I	Y	T	F	K	L
Template Known Secondary structure																								T	T		S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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