Return to main results Retrieve Phyre Job Id

Job DescriptionP40719
Confidence99.92%DateWed Jan 25 15:20:54 GMT 2012
Rank18Aligned Residues139
% Identity16%Templatec2ch4A_
PDB info PDB header:transferase/chemotaxisChain: A: PDB Molecule:chemotaxis protein chea; PDBTitle: complex between bacterial chemotaxis histidine kinase chea2 domains p4 and p5 and receptor-adaptor protein chew
Resolution3.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   311........320.........330.........340...... ...350.........360........ .370.......
Predicted Secondary structure 















.

............



Query SS confidence 



































.





















. . . . . . . . . . . .








Query Sequence  IPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHSIKR. TGQPLLLSLLVRNLLDNAVRYS. . . . . . . . . . . . PQGSVVDVT
Query Conservation    
                                 .  
   
  

 


 

 
  ............     
 
 
Alig confidence 



































.





















............








Template Conservation   
       
   
   
   

 
 
         
      
   
  

 


    
    
   

   
 
 
 
Template Sequence  VPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILS
Template Known Secondary structure  TTSTTT


TT
TTTTTS

TT

SS
Template Predicted Secondary structure 





















Template SS confidence 















































































   356...360.........370.........380.........390.........400.........410.........420.........430.....
 
   378.380.. .......390... ......400.........410.. .......420.......
Predicted Secondary structure  ....





........................









..



Query SS confidence 




. . . .










. . . . . . . . . . . . . . . . . . . . . . . .


















. .














Query Sequence  LNADN. . . . FIVRDNGPGVT. . . . . . . . . . . . . . . . . . . . . . . . PEALARIGERFYRPPGQTA. . TGSGLGLSIVQRIAK
Query Conservation       ....
 
 
 
 

 ........................      


 
 
      .. 
 



 

  

 
Alig confidence 




....










........................


















..














Template Conservation           
 
 
 
 

    
   
                 
    

    
         
 



  
     
Template Sequence  ARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVE
Template Known Secondary structure 
SS
SS


TT
S
TTGGGS

TTTSTTTT


STSS


Template Predicted Secondary structure 

































Template SS confidence 















































































   436...440.........450.........460.........470.........480.........490.........500.........510.....
 
   428.430.........440.........
Predicted Secondary structure 







Query SS confidence 





















Query Sequence  LHGMNVEFGNAEQGGFEAKVSW
Query Conservation    

 
 
 
    

 
 
 
Alig confidence 





















Template Conservation     
 
   
    

      
Template Sequence  SLNGSISIESEKDKGTKVTIRL
Template Known Secondary structure  TT

TTS
Template Predicted Secondary structure 






Template SS confidence 





















   516...520.........530.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions