Job Description P40719 Confidence 100.00% Date Wed Jan 25 15:20:54 GMT 2012 Rank 5 Aligned Residues 273 % Identity 13% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	I	I	M	M	V	L	L	G	R	E	L	A	P	L	N	K	L	A	L	A	L	R	M	R	D	P	D	S	E	K	P	L	N	A	T	G	V	P	S	E	V	R	P	L	V	E	S	L	N	Q	L	F	A	R	T	H	A	M	M	V	R	E	R	R	F	T	S	D	A	A	H	E	L	R	S	P	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	T	S	F	T	F	L	R	Q	E	L	P	V	R	L	A	N	I	M	K	E	I	N	L	L	P	D	R	V	L	S	T	P	S	V	Q	L	V	Q	S	W	Y	V	Q	S	L	L	D	I	M	E	F	L	D	K	D	P	E	D	H	R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N	D
Template Known Secondary structure																									T	T	S						T	S																			T	T	S	S			T	T	S	T	T	T	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.						.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure													.	.	.	.	.	.	.																																													.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.																																													.	.	.	.	.
Query Sequence		A	L	K	V	Q	T	E	V	A	Q	L	.	.	.	.	.	.	.	S	D	D	D	P	Q	A	R	K	K	A	L	L	Q	L	H	S	G	I	D	R	A	T	R	L	V	D	Q	L	L	T	L	S	R	L	D	S	L	D	N	L	Q	D	V	.	.	.	.	.	A	E	I	P	L	E	D	L	L	Q	S	S	V
Query Conservation													.	.	.	.	.	.	.																																													.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation
Template Sequence		V	V	P	T	M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S	I	R	M	L	I	N	Q	H	T	L	I	F	D	G	S	T	N	P	A	H	P	K	H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y
Template Known Secondary structure																																																				T	S	S	S		S	S		S		S		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.									.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.								.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.																.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.																.	.	.	.
Query Sequence		M	D	I	Y	H	T	A	Q	Q	A	K	I	D	.	.	.	.	.	.	.	.	V	R	L	T	L	N	A	H	S	I	K	R	T	G	Q	P	L	L	L	S	L	L	V	R	N	L	L	D	N	A	V	R	Y	.	.	.	.	.	.	.	S	P	Q	G	S	V	V	D	V	T	L	N	A	D	N	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.																.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H	L	Y	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	S	H	E	S	S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	D	L	S
Template Known Secondary structure													S												S	S	S	T	T	S																													T	T	T	T		S													S	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	V	R	D	N	G	P	G	V	T	P	E	A	L	A	R	I	G	E	R	F	Y	R	P	P	G	Q	T	A	T	G	S	G	L	G	L	S	I	V	Q	R	I	A	K	L	H	G	M	N	V	E	F	G	N	A	E	Q	G	G	F	E	A	K	V	S	W
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y	.	.	.	S	T	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	Q	L	F	S	M	E	G	F	G	T	D	A	V	I	Y	L
Template Known Secondary structure																	G	G	G	G		T	T	T	.	.	.	T						S	S													T	T									T	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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