Return to main results Retrieve Phyre Job Id

Job DescriptionP40719
Confidence97.62%DateWed Jan 25 15:20:54 GMT 2012
Rank60Aligned Residues90
% Identity18%Templatec2akpA_
PDB info PDB header:chaperoneChain: A: PDB Molecule:atp-dependent molecular chaperone hsp82; PDBTitle: hsp90 delta24-n210 mutant
Resolution1.94 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   356...360....... ..370.........380.. .......390.........400.......
Predicted Secondary structure  ................




..










..........
Query SS confidence 











. . . . . . . . . . . . . . . .














. .
























. . . . . . . . . .
Query Sequence  LVRNLLDNAVRY. . . . . . . . . . . . . . . . SPQGSVVDVTLNADN. . FIVRDNGPGVTPEALARIGERFYRP. . . . . . . . . .
Query Conservation 

 


 

 
 ................      
 
      ..
 
 
 
 

       


 
 
 ..........
Alig confidence 











................














..
























..........
Template Conservation   







 

                      
          
 
 


 

    
      

 
 
        
Template Sequence  FLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALS
Template Known Secondary structure 
TTS



TTTT
S





T
Template Predicted Secondary structure 






























Template SS confidence 















































































   30.........40.........50.........60.........70.........80.........90.........100.........
 
   408.410.........420.........430.........440.........
Predicted Secondary structure  ...
















Query SS confidence  . . .









































Query Sequence  . . . PGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW
Query Conservation  ...      
 



 

  

   

 
 
 
    

 
 
 
Alig confidence  ...



















....

















Template Conservation         

  


  
 
    ....   
 
            
Template Sequence  AGADVSMIGQFGVGFYSLFLVAD. . . . RVQVISKSNDDEQYIWES
Template Known Secondary structure  TTS


SSSTT

GGGGGGGT....
TTS

Template Predicted Secondary structure 















....





Template SS confidence 












































   110.........120.........130.. .......140.........150
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions