Job Description P40719 Confidence 98.19% Date Wed Jan 25 15:20:54 GMT 2012 Rank 47 Aligned Residues 93 % Identity 22% Template c1zxnB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna topoisomerase ii, alpha isozyme; PDBTitle: human dna topoisomerase iia atpase/adp Resolution 2.51 Å

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.				.	.	.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.									.	.	.	.	400	.	.	.	.	.	.	.	.	.								410	.	.
Predicted Secondary structure																					.	.	.											.	.															.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Query SS confidence																					.	.	.											.	.															.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Query Sequence		L	S	L	L	V	R	N	L	L	D	N	A	V	R	Y	S	P	Q	G	.	.	.	S	V	V	D	V	T	L	N	A	D	.	.	N	F	I	V	R	D	N	G	P	G	V	T	P	E	.	.	.	.	.	.	.	.	A	L	A	R	I	G	E	R	F	Y	R	P	P	G	.	.	.	.	.	.	.	Q	T	A
Query Conservation																					.	.	.											.	.															.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Alig confidence																					.	.	.											.	.															.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	K	I	F	D	E	I	L	V	N	A	A	D	N	K	Q	R	D	P	K	M	S	C	I	R	V	T	I	D	P	E	N	N	L	I	S	I	W	N	N	G	K	G	I	P	V	V	E	H	K	V	E	K	M	Y	V	P	A	L	I	F	G	Q	L	L	T	S	S	N	Y	D	D	D	E	K	K	V	T	G
Template Known Secondary structure																G	G	G	T		T	T										T	T	T	T								S	S					S			T	T	T	T										S	S	S			S				G	G	G					S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		T	G	S	G	L	G	L	S	I	V	Q	R	I	A	K	L	H	G	M	N	V	E	F	G	N	A	.	E	Q	G	G	F	E	A	K	V	S	W
Query Conservation																												.
Alig confidence									.	.	.	.																.
Template Conservation									.	.	.	.
Template Sequence		G	R	N	G	Y	G	A	.	.	.	.	K	L	C	N	I	F	S	T	K	F	T	V	E	T	A	S	R	E	Y	K	K	M	F	K	Q	T	W
Template Known Secondary structure				S	S				.	.	.	.						T											G	G	G	T
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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