Job Description P40719 Confidence 98.31% Date Wed Jan 25 15:20:54 GMT 2012 Rank 44 Aligned Residues 96 % Identity 25% Template c1kijB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: crystal structure of the 43k atpase domain of thermus thermophilus2 gyrase b in complex with novobiocin Resolution 2.30 Å

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		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.									.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																											.	.										.															.	.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																											.	.										.															.	.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		Q	P	L	L	L	S	L	L	V	R	N	L	L	D	N	A	V	R	Y	S	P	Q	G	S	V	.	.	V	D	V	T	L	N	A	D	N	.	F	I	V	R	D	N	G	P	G	V	T	P	E	A	.	.	.	.	.	.	.	.	L	A	R	I	G	E	R	F	Y	R	P	P	G	Q	T	A	.	.	.	.	.
Query Conservation																											.	.										.															.	.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																											.	.										.															.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		G	V	E	G	Y	H	H	L	F	K	E	I	L	D	N	A	V	D	E	A	L	A	G	Y	A	T	E	I	L	V	R	L	N	E	D	G	S	L	T	V	E	D	N	G	R	G	I	P	V	D	L	M	P	E	E	G	K	P	A	V	E	V	I	Y	N	T	L	H	S	G	G	K	F	E	Q	G	A	Y	K	V
Template Known Secondary structure		S																					T	T	S										T	T	S							S	S						S			T	T	T	T										S	S				S	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
				413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	G	S	G	L	G	L	S	I	V	Q	R	I	A	K	L	H	G	M	N	V	E	F	G	N	A	E	Q	G	G	F	E	A	K	V	S	W
Query Conservation		.	.
Alig confidence		.	.																.	.	.	.										.
Template Conservation																			.	.	.	.										.
Template Sequence		S	G	G	L	H	G	V	G	A	S	V	V	N	A	L	S	E	.	.	.	.	W	T	V	V	E	V	F	R	E	.	G	K	H	H	R	I	A	F
Template Known Secondary structure			S		S	S	T	T	S							T			.	.	.	.									T	.	T
Template Predicted Secondary structure																			.	.	.	.										.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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