Job Description P27896 Confidence 99.29% Date Wed Jan 25 15:20:46 GMT 2012 Rank 30 Aligned Residues 150 % Identity 13% Template d1ixma_ SCOP info Sporulation response regulatory protein Spo0B Sporulation response regulatory protein Spo0B Sporulation response regulatory protein Spo0B Resolution 2.60

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		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	M	E	E	R	A	T	I	A	R	E	L	H	D	S	L	A	Q	V	L	S	Y	L	R	I	Q	L	T	L	L	K	R	S	I	P	E	D	N	A	T	A	Q	S	I	M	A	D	F	S	Q	A	L	N	D	A	Y	R	Q	L	R	E	L	L	T	T	F	R	L	T	L	Q	Q	A	D	L	P	S	A
Query Conservation
Alig confidence																																	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	L	T	N	E	L	I	H	L	L	G	H	S	R	H	D	W	M	N	K	L	Q	L	I	K	G	N	L	S	L	.	.	.	.	.	.	Q	K	Y	D	R	V	F	E	M	I	E	E	M	V	I	D	A	K	H	E	S	K	L	S	N	.	.	.	.	.	.	.	.	.	.	.	.	L	K	T	P	H	L
Template Known Secondary structure																																T	.	.	.	.	.	.	T																								T	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70													.	.	.	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.						490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		L	R	E	M	L	D	T	L	Q	N	Q	T	S	A	K	L	T	L	D	C	R	L	P	T	L	A	L	D	A	Q	M	Q	V	H	L	L	Q	I	I	R	E	A	V	L	N	A	M	K	H	A	N	A	S	E	.	.	.	.	.	I	A	V	S	C	V	T	A	P	D	G	N	H	T	V	Y	I	R	D	N	G
Query Conservation																																																								.	.	.	.	.
Alig confidence																													.																											.	.	.	.	.							.
Template Conservation																													.																																						.
Template Sequence		A	F	D	F	L	T	F	N	W	K	T	H	Y	M	T	L	E	Y	E	V	L	G	E	I	K	D	L	.	S	A	Y	D	Q	K	L	A	K	L	M	R	K	L	F	H	L	F	D	Q	A	V	S	R	E	S	E	N	H	L	T	V	S	L	Q	T	D	.	H	P	D	R	Q	L	I	L	Y	L	D	F	H	G
Template Known Secondary structure								G	G	G	S			S	S								S	S					.	T	T	T																			B		T	T	S												.		S	S	S	S									S
Template Predicted Secondary structure																													.																																						.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.
		511	.	.	.	.	.	.	.	.												520	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	I	G	E	P	K	E	P	.	.	.	.	.	.	.	.	.	.	.	E	G	H	Y	G	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	A	D	P	S	A	F	D	I	M	R	F	E	I	T	S	H	E	C	L	I	E	I	G	L
Template Known Secondary structure			B	S		G	G	G										S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions