Job Description P27896 Confidence 99.86% Date Wed Jan 25 15:20:46 GMT 2012 Rank 20 Aligned Residues 139 % Identity 23% Template c3jz3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:sensor protein qsec; PDBTitle: structure of the cytoplasmic segment of histidine kinase qsec Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.								.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.				.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure																									.	.	.	.	.	.	.																								.	.	.
Query SS confidence																									.	.	.	.	.	.	.																								.	.	.
Query Sequence		M	A	D	F	S	Q	A	L	N	D	A	Y	R	Q	L	R	E	L	L	T	T	F	R	.	.	.	.	.	.	.	L	T	L	Q	Q	A	D	L	P	S	A	L	R	E	M	L	D	T	L	Q	N	Q	T	.	.	.	S	A	K	L	T	L	D	C	R	L	P	T	L	A	L	D	A	Q	M	Q	V	H	L	L
Query Conservation																									.	.	.	.	.	.	.																								.	.	.
Alig confidence																									.	.	.	.	.	.	.																								.	.	.										.
Template Conservation																																																																			.
Template Sequence		L	L	Q	L	H	S	G	I	D	R	A	T	R	L	V	D	Q	L	L	T	L	S	R	L	D	S	L	D	N	L	Q	D	V	A	E	I	P	L	E	D	L	L	Q	S	S	V	X	D	I	Y	H	T	A	Q	Q	A	K	I	D	V	R	L	T	L	N	.	A	H	S	I	K	R	T	G	Q	P	L	L	L	S
Template Known Secondary structure																							T	T				S	T	T		T	T																								T	T								S	.			S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.		.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		Q	I	I	R	E	A	V	L	N	A	M	K	H	A	.	N	A	S	E	I	A	V	S	C	V	T	A	P	D	G	N	H	T	V	Y	I	R	D	N	G	I	G	I	G	E	P	K	E	P	E	G	H	Y	G	L	N	I	M	R	E	R	A	E	R	L	G	G	T	L	T	F	S	Q	P	S	G	G	G	T	L
Query Conservation																.
Alig confidence																.														.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	V	R	N	L	L	D	N	A	V	R	Y	S	P	Q	G	S	V	V	D	V	T	L	N	A	D	N	.	.	.	.	.	F	I	V	R	D	N	G	P	G	.	.	.	.	.	.	.	.	.	.	.	G	L	S	I	V	Q	R	I	A	K	L	H	G	X	N	V	E	F	G	N	A	E	Q	G	G	F	E
Template Known Secondary structure														S			T	T									S	S		.	.	.	.	.						S	S			.	.	.	.	.	.	.	.	.	.	.												T	T									T	T	S	S
Template Predicted Secondary structure																														.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.						.	.	.	.	.	.	.	390	.												.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		551	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	I	S	F	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	V	S	W	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions