Return to main results Retrieve Phyre Job Id

Job DescriptionP27896
Confidence17.04%DateWed Jan 25 15:20:46 GMT 2012
Rank86Aligned Residues63
% Identity22%Templatec2crqA_
PDB info PDB header:translationChain: A: PDB Molecule:mitochondrial translational initiation factor 3; PDBTitle: solution structure of c-terminal domain of riken cdna2 2810012l14
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   497..500.........510.........520.........530.........540..... ....550..... ....560....
Predicted Secondary structure 


















...


.








Query SS confidence 
















































. . .









.








Query Sequence  APDGNHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPS. . . GGGTLVSISF. RSAEGEESQ
Query Conservation       
 
 
 


 

  
   





 

   
    
 
 
 
  ...
 

   
 
.
     
  
Alig confidence 





















.....





















...









.








Template Conservation 
 
 





 




    
 .....
  

 

   
 
 
 

  


  


     
 
   
  
 
Template Sequence  EKKYHVQVTIKRRKDAEQSEEE. . . . . TEEIFNQILQTMPDIATFSSRPKAIRGGTASMCVFRHLSKKEEKS
Template Known Secondary structure  TT


TT
S

.....TTSTTT
GGGT

SSS


S
Template Predicted Secondary structure 









.....

















Template SS confidence 







































































   41........50.........60.. .......70.........80.........90.........100.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions