Job Description P27896 Confidence 99.97% Date Wed Jan 25 15:20:46 GMT 2012 Rank 6 Aligned Residues 222 % Identity 14% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.							390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.
Query Sequence		R	G	L	Y	F	N	Q	A	Q	K	H	F	Q	Q	L	L	L	M	E	E	R	A	T	I	A	R	E	L	H	D	S	L	A	Q	V	L	S	Y	L	R	I	Q	L	T	L	L	K	R	.	.	.	.	.	.	S	I	P	E	D	N	A	T	A	Q	S	I	M	A	D	F	S	Q	A	L	N	D	A	Y	R	Q
Query Conservation																																																		.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	S	L	L	D	I	M	E	F	L	D	K	D	P	E	D	H	R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S	I	R	M	L
Template Known Secondary structure										T	T	S	S			T	T	S	T	T	T	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		416	.	.	.	420	.	.	.	.	.	.	.													.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.											.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	E	L	L	T	T	F	R	L	T	L	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	A	D	L	P	S	A	L	R	E	M	L	D	T	L	Q	N	.	.	.	.	.	.	.	.	.	.	Q	T	S	A	K	L	T	L	D	C	R	L	P	T	L	A	L	D	A	Q	M	Q	V	H	L	L	Q	I
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	Q	H	T	L	I	F	D	G	S	T	N	P	A	H	P	K	H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y	D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H	L	Y	H	M
Template Known Secondary structure									T	S	S	S		S	S		S		S		B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		474	.	.	.	.	.	480	.	.	.	.									.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.													.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	E	A	V	L	N	A	M	K	H	.	.	.	.	.	.	.	.	A	N	A	S	E	I	A	V	S	C	V	T	A	P	D	G	N	H	T	V	Y	I	R	D	N	G	I	G	I	G	E	P	.	.	.	.	.	.	.	.	.	.	.	.	K	E	P	E	G	H	Y	G	L	N	I	M	R	E	R	A	E
Query Conservation													.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.																.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		L	F	E	L	F	K	N	A	M	R	A	T	V	E	S	H	E	S	S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	.	D	L	S	I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y	S	T	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K
Template Known Secondary structure																T	T	T	T		S													S	S	.																			G	G	G	G		T	T	T	T						S	S
Template Predicted Secondary structure																																				.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	G	G	T	L	T	F	S	Q	P	S	G	G	G	T	L	V	S	I	S	F	R	S	A	E	G	E	E	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	F	Q	G	D	L	Q	L	F	S	M	E	G	F	G	T	D	A	V	I	Y	L	K	A	L	S	T	D	S	V	E
Template Known Secondary structure			T	T									T	T											S	S	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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