Job Description P27896 Confidence 99.97% Date Wed Jan 25 15:20:46 GMT 2012 Rank 3 Aligned Residues 240 % Identity 17% Template c1gjvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase PDBTitle: branched-chain alpha-ketoacid dehydrogenase kinase (bck)2 complxed with atp-gamma-s Resolution 2.7 Å

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		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.			.	.	.	.	.	.	.	.	400
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		N	S	H	V	S	S	S	E	P	L	L	N	S	V	S	S	M	L	G	R	G	L	Y	F	N	Q	A	Q	K	H	F	Q	Q	L	L	L	M	E	E	R	A	T	I	A	R	E	L	H	D	S	L	A	Q	V	L	S	Y	L	R	I	Q	L	T	L	L	K	R	S	I	.	.	P	E	D	N	A	T	A	Q	S
Query Conservation																																																																							.	.
Alig confidence																																																																							.	.
Template Conservation
Template Sequence		F	R	S	L	P	F	I	I	G	C	N	P	T	I	L	H	V	H	E	L	Y	I	R	A	F	Q	K	L	T	D	F	P	P	I	K	D	Q	A	D	E	A	Q	Y	C	Q	L	V	R	Q	L	L	D	D	H	K	D	V	V	T	L	L	A	E	G	L	R	E	S	R	K	H	I	E	D	E	K	L	V	R	Y
Template Known Secondary structure					S						T	S																			T	S					S																		T	T	T													T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.								.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.					.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		I	M	A	D	F	S	Q	A	L	N	D	A	Y	R	Q	L	R	E	L	L	T	T	F	R	L	T	L	.	.	.	.	.	.	.	Q	Q	A	D	L	P	S	A	L	R	E	M	L	D	T	L	Q	.	.	.	.	N	Q	T	S	A	K	L	T	L	D	C	R	L	P	T	L	A	L	D	A	Q	M	Q	V	H
Query Conservation																													.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																													.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		F	L	D	K	T	L	T	S	R	L	G	I	R	M	L	A	T	H	H	L	A	L	H	E	D	K	P	D	F	V	G	I	I	C	T	R	L	S	P	K	K	I	I	E	K	W	V	D	F	A	R	R	L	C	E	H	K	Y	G	N	A	P	R	V	R	I	N	G	H	V	A	A	R	F	P	F	I	P	M	P
Template Known Secondary structure																							T	T	S			T	T			T	T																											S										S	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.										.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.											.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	Q	I	I	R	E	A	V	L	N	A	M	K	H	.	.	.	.	.	.	.	.	.	A	N	A	S	E	I	A	V	S	C	V	T	A	P	D	G	N	H	T	V	Y	I	R	D	N	G	I	G	I	G	E	P	K	E	.	.	.	.	.	.	.	.	.	.	P	E	G	H	Y	G	L	N	I	M	R	E
Query Conservation																	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.
Template Sequence		L	D	Y	I	L	P	E	L	L	K	N	A	M	R	A	T	M	E	S	H	L	D	T	P	Y	N	V	P	D	V	V	I	T	I	A	N	N	D	V	.	D	L	I	I	R	I	S	D	R	G	G	G	I	A	H	K	D	L	D	R	V	M	D	Y	H	F	T	T	A	G	F	G	F	G	L	P	T	S	R	A
Template Known Secondary structure																				T		T	T		T	T	S												S	S	.										S					G	G	G	T	T	T	T	T	S	T	T							S
Template Predicted Secondary structure																																									.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	E	R	L	G	G	T	L	T	F	S	Q	P	S	G	G	G	T	L	V	S	I	S	F	R	S	A	E	G	E	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	E	Y	L	G	G	S	L	Q	L	Q	S	L	Q	G	I	G	T	D	V	Y	L	R	L	R	H	I	D	G	R	E	E
Template Known Secondary structure							T									T	T	T											S	S	S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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