Job Description P64423 Confidence 6.42% Date Thu Jan 5 12:08:12 GMT 2012 Rank 97 Aligned Residues 71 % Identity 15% Template c3a7pB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:autophagy protein 16; PDBTitle: the crystal structure of saccharomyces cerevisiae atg16 Resolution 2.80 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	Q	Q	I	P	P	R	G	F	L	A	L	L	R	K	Q	L	I	V	M	R	R	Y	M	A	P	Q	R	D	V	Y	A	R	L	A	S	E	R	L	P	W	M	S	D	D	Q	R	R	R	M	Q	D	I	A	D	R	L	G	R	G	L	D	E	I	D	A	C	I	A	R	T	G	V	M	A	D	E	I	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	H	D	D	A	L	L	N	T	L	A	I	L	Q	K	E	L	K	S	K	E	Q	E	I	R	R	L	K	E	V	I	.	.	.	.	.	.	.	.	.	.	.	.	A	L	K	N	K	N	T	E	R	L	N	A	A	L	I	S	G	T	I	E	N	N	V	L	Q	Q	K	L	S	D	L	K	K	E	H	S
Template Known Secondary structure				S	S																													.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.													90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		257	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		126	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions